Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29,78■■■□□ 2,36
Rnf168Q80XJ2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Rnf168Q80XJ2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Rnf168Q80XJ2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,72■■■□□ 2,35
Rnf168Q80XJ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Rnf168Q80XJ2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,64■■■□□ 2,33
Rnf168Q80XJ2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,63■■■□□ 2,33
Rnf168Q80XJ2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Rnf168Q80XJ2 Gm17082-201ENSMUST00000166043 1091 ntBASIC29,61■■■□□ 2,33
Rnf168Q80XJ2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Rnf168Q80XJ2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,46■■■□□ 2,31
Rnf168Q80XJ2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Rnf168Q80XJ2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,31
Rnf168Q80XJ2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Rnf168Q80XJ2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,43■■■□□ 2,3
Rnf168Q80XJ2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,39■■■□□ 2,3
Rnf168Q80XJ2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,37■■■□□ 2,29
Rnf168Q80XJ2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,36■■■□□ 2,29
Rnf168Q80XJ2 Gm27322-201ENSMUST00000184007 104 ntBASIC29,36■■■□□ 2,29
Rnf168Q80XJ2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,32■■■□□ 2,28
Rnf168Q80XJ2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Rnf168Q80XJ2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Rnf168Q80XJ2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,29■■■□□ 2,28
Rnf168Q80XJ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,29■■■□□ 2,28
Rnf168Q80XJ2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29,28■■■□□ 2,28
Rnf168Q80XJ2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Rnf168Q80XJ2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
Rnf168Q80XJ2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,18■■■□□ 2,26
Rnf168Q80XJ2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29,16■■■□□ 2,26
Rnf168Q80XJ2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Rnf168Q80XJ2 Gm24804-201ENSMUST00000174982 85 ntBASIC29,11■■■□□ 2,25
Rnf168Q80XJ2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rnf168Q80XJ2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rnf168Q80XJ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29,09■■■□□ 2,25
Rnf168Q80XJ2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29,07■■■□□ 2,24
Rnf168Q80XJ2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Rnf168Q80XJ2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,02■■■□□ 2,24
Rnf168Q80XJ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,02■■■□□ 2,24
Rnf168Q80XJ2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Rnf168Q80XJ2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28,99■■■□□ 2,23
Rnf168Q80XJ2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Rnf168Q80XJ2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28,93■■■□□ 2,22
Rnf168Q80XJ2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28,9■■■□□ 2,22
Rnf168Q80XJ2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,22
Rnf168Q80XJ2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
Rnf168Q80XJ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28,79■■■□□ 2,2
Rnf168Q80XJ2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Rnf168Q80XJ2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28,75■■■□□ 2,19
Rnf168Q80XJ2 AC166822.3-201ENSMUST00000227394 661 ntBASIC28,74■■■□□ 2,19
Rnf168Q80XJ2 AL845457.1-201ENSMUST00000197244 68 ntBASIC28,7■■■□□ 2,18
Rnf168Q80XJ2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28,7■■■□□ 2,18
Rnf168Q80XJ2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28,67■■■□□ 2,18
Rnf168Q80XJ2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Rnf168Q80XJ2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Rnf168Q80XJ2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Rnf168Q80XJ2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
Rnf168Q80XJ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Rnf168Q80XJ2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Rnf168Q80XJ2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Rnf168Q80XJ2 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,61■■■□□ 2,17
Rnf168Q80XJ2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Rnf168Q80XJ2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28,6■■■□□ 2,17
Rnf168Q80XJ2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28,6■■■□□ 2,17
Rnf168Q80XJ2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Rnf168Q80XJ2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Rnf168Q80XJ2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Rnf168Q80XJ2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,56■■■□□ 2,16
Rnf168Q80XJ2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28,55■■■□□ 2,16
Rnf168Q80XJ2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28,54■■■□□ 2,16
Rnf168Q80XJ2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28,53■■■□□ 2,16
Rnf168Q80XJ2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,48■■■□□ 2,15
Rnf168Q80XJ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28,46■■■□□ 2,15
Rnf168Q80XJ2 Zfp131-205ENSMUST00000223812 663 ntBASIC28,45■■■□□ 2,14
Rnf168Q80XJ2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Rnf168Q80XJ2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28,39■■■□□ 2,14
Rnf168Q80XJ2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Rnf168Q80XJ2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28,32■■■□□ 2,12
Rnf168Q80XJ2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28,3■■■□□ 2,12
Rnf168Q80XJ2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Rnf168Q80XJ2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
Rnf168Q80XJ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Rnf168Q80XJ2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28,24■■■□□ 2,11
Rnf168Q80XJ2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28,23■■■□□ 2,11
Rnf168Q80XJ2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Rnf168Q80XJ2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Rnf168Q80XJ2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28,18■■■□□ 2,1
Rnf168Q80XJ2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28,18■■■□□ 2,1
Rnf168Q80XJ2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28,17■■■□□ 2,1
Rnf168Q80XJ2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28,17■■■□□ 2,1
Rnf168Q80XJ2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,17■■■□□ 2,1
Rnf168Q80XJ2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Rnf168Q80XJ2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Rnf168Q80XJ2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28,14■■■□□ 2,1
Rnf168Q80XJ2 Gm16148-201ENSMUST00000119653 893 ntBASIC28,12■■■□□ 2,09
Rnf168Q80XJ2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,12■■■□□ 2,09
Rnf168Q80XJ2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28,11■■■□□ 2,09
Rnf168Q80XJ2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28,11■■■□□ 2,09
Rnf168Q80XJ2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28,11■■■□□ 2,09
Rnf168Q80XJ2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,07■■■□□ 2,08
Rnf168Q80XJ2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms