Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Usp6nlQ80XC3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Usp6nlQ80XC3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Usp6nlQ80XC3 Gm10524-201ENSMUST00000181931 1893 ntBASIC31,46■■■□□ 2,63
Usp6nlQ80XC3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31,45■■■□□ 2,63
Usp6nlQ80XC3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,43■■■□□ 2,62
Usp6nlQ80XC3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31,41■■■□□ 2,62
Usp6nlQ80XC3 Gm27322-201ENSMUST00000184007 104 ntBASIC31,4■■■□□ 2,62
Usp6nlQ80XC3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Usp6nlQ80XC3 Gm42596-201ENSMUST00000196305 1958 ntBASIC31,36■■■□□ 2,61
Usp6nlQ80XC3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31,34■■■□□ 2,61
Usp6nlQ80XC3 Gm24804-201ENSMUST00000174982 85 ntBASIC31,31■■■□□ 2,6
Usp6nlQ80XC3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Usp6nlQ80XC3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31,28■■■□□ 2,6
Usp6nlQ80XC3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31,26■■■□□ 2,6
Usp6nlQ80XC3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31,23■■■□□ 2,59
Usp6nlQ80XC3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Usp6nlQ80XC3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Usp6nlQ80XC3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31,12■■■□□ 2,57
Usp6nlQ80XC3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31,11■■■□□ 2,57
Usp6nlQ80XC3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Usp6nlQ80XC3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31,06■■■□□ 2,56
Usp6nlQ80XC3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30,99■■■□□ 2,55
Usp6nlQ80XC3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30,94■■■□□ 2,54
Usp6nlQ80XC3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Usp6nlQ80XC3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30,88■■■□□ 2,53
Usp6nlQ80XC3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Usp6nlQ80XC3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30,86■■■□□ 2,53
Usp6nlQ80XC3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30,8■■■□□ 2,52
Usp6nlQ80XC3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30,78■■■□□ 2,52
Usp6nlQ80XC3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Usp6nlQ80XC3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Usp6nlQ80XC3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,74■■■□□ 2,51
Usp6nlQ80XC3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30,71■■■□□ 2,51
Usp6nlQ80XC3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Usp6nlQ80XC3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30,69■■■□□ 2,5
Usp6nlQ80XC3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Usp6nlQ80XC3 AC166822.3-201ENSMUST00000227394 661 ntBASIC30,67■■■□□ 2,5
Usp6nlQ80XC3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Usp6nlQ80XC3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Usp6nlQ80XC3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30,64■■■□□ 2,5
Usp6nlQ80XC3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30,63■■■□□ 2,49
Usp6nlQ80XC3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30,63■■■□□ 2,49
Usp6nlQ80XC3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Usp6nlQ80XC3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30,59■■■□□ 2,49
Usp6nlQ80XC3 AL845457.1-201ENSMUST00000197244 68 ntBASIC30,59■■■□□ 2,49
Usp6nlQ80XC3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Usp6nlQ80XC3 Zfp131-205ENSMUST00000223812 663 ntBASIC30,57■■■□□ 2,48
Usp6nlQ80XC3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
Usp6nlQ80XC3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30,52■■■□□ 2,48
Usp6nlQ80XC3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Usp6nlQ80XC3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30,46■■■□□ 2,47
Usp6nlQ80XC3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Usp6nlQ80XC3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Usp6nlQ80XC3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30,42■■■□□ 2,46
Usp6nlQ80XC3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Usp6nlQ80XC3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
Usp6nlQ80XC3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Usp6nlQ80XC3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Usp6nlQ80XC3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30,29■■■□□ 2,44
Usp6nlQ80XC3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30,27■■■□□ 2,44
Usp6nlQ80XC3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
Usp6nlQ80XC3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Usp6nlQ80XC3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Usp6nlQ80XC3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Usp6nlQ80XC3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30,19■■■□□ 2,42
Usp6nlQ80XC3 Zfp131-207ENSMUST00000224946 1783 ntBASIC30,19■■■□□ 2,42
Usp6nlQ80XC3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30,19■■■□□ 2,42
Usp6nlQ80XC3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
Usp6nlQ80XC3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30,14■■■□□ 2,42
Usp6nlQ80XC3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Usp6nlQ80XC3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30,09■■■□□ 2,41
Usp6nlQ80XC3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30,06■■■□□ 2,4
Usp6nlQ80XC3 Gm16148-201ENSMUST00000119653 893 ntBASIC30,05■■■□□ 2,4
Usp6nlQ80XC3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30,02■■■□□ 2,4
Usp6nlQ80XC3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30,01■■■□□ 2,39
Usp6nlQ80XC3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29,99■■■□□ 2,39
Usp6nlQ80XC3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,99■■■□□ 2,39
Usp6nlQ80XC3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Usp6nlQ80XC3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29,98■■■□□ 2,39
Usp6nlQ80XC3 Peli2-204ENSMUST00000226513 1320 ntBASIC29,96■■■□□ 2,39
Usp6nlQ80XC3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Usp6nlQ80XC3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Usp6nlQ80XC3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29,91■■■□□ 2,38
Usp6nlQ80XC3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Usp6nlQ80XC3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Usp6nlQ80XC3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
Usp6nlQ80XC3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Usp6nlQ80XC3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29,88■■■□□ 2,37
Usp6nlQ80XC3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Usp6nlQ80XC3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29,84■■■□□ 2,37
Usp6nlQ80XC3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29,83■■■□□ 2,37
Usp6nlQ80XC3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Usp6nlQ80XC3 Tdp2-203ENSMUST00000223804 1136 ntBASIC29,79■■■□□ 2,36
Usp6nlQ80XC3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29,78■■■□□ 2,36
Usp6nlQ80XC3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29,78■■■□□ 2,36
Usp6nlQ80XC3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29,76■■■□□ 2,35
Usp6nlQ80XC3 Mipep-204ENSMUST00000225043 1548 ntBASIC29,76■■■□□ 2,35
Usp6nlQ80XC3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Usp6nlQ80XC3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29,75■■■□□ 2,35
Retrieved 100 of 76,532 protein–RNA pairs in 13,9 ms