Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Zfp131-205ENSMUST00000223812 663 ntBASIC29.24■■■□□ 2.27
Tnrc18Q80WC3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Tnrc18Q80WC3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tnrc18Q80WC3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.07■■■□□ 2.24
Tnrc18Q80WC3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Tnrc18Q80WC3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.05■■■□□ 2.24
Tnrc18Q80WC3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tnrc18Q80WC3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tnrc18Q80WC3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Tnrc18Q80WC3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Tnrc18Q80WC3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tnrc18Q80WC3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tnrc18Q80WC3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tnrc18Q80WC3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Tnrc18Q80WC3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Tnrc18Q80WC3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Tnrc18Q80WC3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tnrc18Q80WC3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tnrc18Q80WC3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tnrc18Q80WC3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tnrc18Q80WC3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Tnrc18Q80WC3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.77■■■□□ 2.2
Tnrc18Q80WC3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.77■■■□□ 2.2
Tnrc18Q80WC3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Tnrc18Q80WC3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tnrc18Q80WC3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Tnrc18Q80WC3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Tnrc18Q80WC3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Tnrc18Q80WC3 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.64■■■□□ 2.18
Tnrc18Q80WC3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tnrc18Q80WC3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Tnrc18Q80WC3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tnrc18Q80WC3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tnrc18Q80WC3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tnrc18Q80WC3 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.56■■■□□ 2.16
Tnrc18Q80WC3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Tnrc18Q80WC3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Tnrc18Q80WC3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.53■■■□□ 2.16
Tnrc18Q80WC3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Tnrc18Q80WC3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tnrc18Q80WC3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tnrc18Q80WC3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Tnrc18Q80WC3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.45■■■□□ 2.14
Tnrc18Q80WC3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tnrc18Q80WC3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Tnrc18Q80WC3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Tnrc18Q80WC3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.42■■■□□ 2.14
Tnrc18Q80WC3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.42■■■□□ 2.14
Tnrc18Q80WC3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Tnrc18Q80WC3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Tnrc18Q80WC3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tnrc18Q80WC3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tnrc18Q80WC3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tnrc18Q80WC3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Tnrc18Q80WC3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.29■■■□□ 2.12
Tnrc18Q80WC3 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.24■■■□□ 2.11
Tnrc18Q80WC3 Gm16148-201ENSMUST00000119653 893 ntBASIC28.22■■■□□ 2.11
Tnrc18Q80WC3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tnrc18Q80WC3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Tnrc18Q80WC3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tnrc18Q80WC3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Tnrc18Q80WC3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tnrc18Q80WC3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.11■■■□□ 2.09
Tnrc18Q80WC3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tnrc18Q80WC3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tnrc18Q80WC3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.06■■■□□ 2.08
Tnrc18Q80WC3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Tnrc18Q80WC3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Tnrc18Q80WC3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Tnrc18Q80WC3 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.03■■■□□ 2.08
Tnrc18Q80WC3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tnrc18Q80WC3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Tnrc18Q80WC3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tnrc18Q80WC3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.01■■■□□ 2.07
Tnrc18Q80WC3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Tnrc18Q80WC3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Tnrc18Q80WC3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.95■■■□□ 2.07
Tnrc18Q80WC3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tnrc18Q80WC3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tnrc18Q80WC3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
Tnrc18Q80WC3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Tnrc18Q80WC3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Tnrc18Q80WC3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tnrc18Q80WC3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tnrc18Q80WC3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Tnrc18Q80WC3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.82■■■□□ 2.04
Tnrc18Q80WC3 Gm45855-201ENSMUST00000212546 880 ntBASIC27.82■■■□□ 2.04
Tnrc18Q80WC3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tnrc18Q80WC3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.82■■■□□ 2.04
Tnrc18Q80WC3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tnrc18Q80WC3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Tnrc18Q80WC3 Peli2-204ENSMUST00000226513 1320 ntBASIC27.79■■■□□ 2.04
Tnrc18Q80WC3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Tnrc18Q80WC3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Tnrc18Q80WC3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Tnrc18Q80WC3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Tnrc18Q80WC3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Tnrc18Q80WC3 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.71■■■□□ 2.03
Tnrc18Q80WC3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Tnrc18Q80WC3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms