Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.77■■■□□ 2.52
Ush1gQ80T11 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ush1gQ80T11 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.71■■■□□ 2.51
Ush1gQ80T11 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.67■■■□□ 2.5
Ush1gQ80T11 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ush1gQ80T11 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.64■■■□□ 2.5
Ush1gQ80T11 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.57■■■□□ 2.48
Ush1gQ80T11 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ush1gQ80T11 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
Ush1gQ80T11 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ush1gQ80T11 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ush1gQ80T11 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Ush1gQ80T11 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
Ush1gQ80T11 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.49■■■□□ 2.47
Ush1gQ80T11 Gm27322-201ENSMUST00000184007 104 ntBASIC30.48■■■□□ 2.47
Ush1gQ80T11 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ush1gQ80T11 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Ush1gQ80T11 Gm24804-201ENSMUST00000174982 85 ntBASIC30.38■■■□□ 2.45
Ush1gQ80T11 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ush1gQ80T11 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.32■■■□□ 2.44
Ush1gQ80T11 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ush1gQ80T11 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ush1gQ80T11 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ush1gQ80T11 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.18■■■□□ 2.42
Ush1gQ80T11 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ush1gQ80T11 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ush1gQ80T11 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ush1gQ80T11 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ush1gQ80T11 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ush1gQ80T11 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ush1gQ80T11 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ush1gQ80T11 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.03■■■□□ 2.4
Ush1gQ80T11 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.03■■■□□ 2.4
Ush1gQ80T11 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ush1gQ80T11 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.97■■■□□ 2.39
Ush1gQ80T11 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ush1gQ80T11 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ush1gQ80T11 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
Ush1gQ80T11 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Ush1gQ80T11 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.92■■■□□ 2.38
Ush1gQ80T11 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Ush1gQ80T11 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ush1gQ80T11 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ush1gQ80T11 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ush1gQ80T11 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Ush1gQ80T11 Zfp131-205ENSMUST00000223812 663 ntBASIC29.79■■■□□ 2.36
Ush1gQ80T11 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ush1gQ80T11 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ush1gQ80T11 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ush1gQ80T11 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ush1gQ80T11 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ush1gQ80T11 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
Ush1gQ80T11 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ush1gQ80T11 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.67■■■□□ 2.34
Ush1gQ80T11 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ush1gQ80T11 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.65■■■□□ 2.34
Ush1gQ80T11 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ush1gQ80T11 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Ush1gQ80T11 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ush1gQ80T11 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ush1gQ80T11 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ush1gQ80T11 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ush1gQ80T11 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ush1gQ80T11 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ush1gQ80T11 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Ush1gQ80T11 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ush1gQ80T11 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.5■■■□□ 2.31
Ush1gQ80T11 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ush1gQ80T11 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.46■■■□□ 2.31
Ush1gQ80T11 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ush1gQ80T11 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ush1gQ80T11 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ush1gQ80T11 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ush1gQ80T11 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Ush1gQ80T11 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.41■■■□□ 2.3
Ush1gQ80T11 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.36■■■□□ 2.29
Ush1gQ80T11 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ush1gQ80T11 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Ush1gQ80T11 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ush1gQ80T11 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.31■■■□□ 2.28
Ush1gQ80T11 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.29■■■□□ 2.28
Ush1gQ80T11 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ush1gQ80T11 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ush1gQ80T11 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ush1gQ80T11 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ush1gQ80T11 Gm16148-201ENSMUST00000119653 893 ntBASIC29.23■■■□□ 2.27
Ush1gQ80T11 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ush1gQ80T11 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Ush1gQ80T11 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ush1gQ80T11 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ush1gQ80T11 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ush1gQ80T11 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Ush1gQ80T11 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ush1gQ80T11 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ush1gQ80T11 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Ush1gQ80T11 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ush1gQ80T11 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ush1gQ80T11 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ush1gQ80T11 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ush1gQ80T11 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms