Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
2210407C18RikQ6YI28 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
2210407C18RikQ6YI28 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.44■■□□□ 1.5
2210407C18RikQ6YI28 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
2210407C18RikQ6YI28 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
2210407C18RikQ6YI28 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.42■■□□□ 1.5
2210407C18RikQ6YI28 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.4■■□□□ 1.5
2210407C18RikQ6YI28 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
2210407C18RikQ6YI28 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
2210407C18RikQ6YI28 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
2210407C18RikQ6YI28 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
2210407C18RikQ6YI28 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
2210407C18RikQ6YI28 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.16■■□□□ 1.46
2210407C18RikQ6YI28 Rab21-202ENSMUST00000218831 843 ntBASIC24.16■■□□□ 1.46
2210407C18RikQ6YI28 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
2210407C18RikQ6YI28 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
2210407C18RikQ6YI28 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
2210407C18RikQ6YI28 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.11■■□□□ 1.45
2210407C18RikQ6YI28 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
2210407C18RikQ6YI28 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
2210407C18RikQ6YI28 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
2210407C18RikQ6YI28 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
2210407C18RikQ6YI28 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.06■■□□□ 1.44
2210407C18RikQ6YI28 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
2210407C18RikQ6YI28 Gm25262-201ENSMUST00000174934 133 ntBASIC24.03■■□□□ 1.44
2210407C18RikQ6YI28 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
2210407C18RikQ6YI28 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
2210407C18RikQ6YI28 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
2210407C18RikQ6YI28 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
2210407C18RikQ6YI28 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
2210407C18RikQ6YI28 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.92■■□□□ 1.42
2210407C18RikQ6YI28 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
2210407C18RikQ6YI28 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.91■■□□□ 1.42
2210407C18RikQ6YI28 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
2210407C18RikQ6YI28 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
2210407C18RikQ6YI28 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
2210407C18RikQ6YI28 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
2210407C18RikQ6YI28 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
2210407C18RikQ6YI28 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
2210407C18RikQ6YI28 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
2210407C18RikQ6YI28 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
2210407C18RikQ6YI28 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
2210407C18RikQ6YI28 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.77■■□□□ 1.4
2210407C18RikQ6YI28 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
2210407C18RikQ6YI28 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.76■■□□□ 1.39
2210407C18RikQ6YI28 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.74■■□□□ 1.39
2210407C18RikQ6YI28 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
2210407C18RikQ6YI28 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
2210407C18RikQ6YI28 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.7■■□□□ 1.38
2210407C18RikQ6YI28 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
2210407C18RikQ6YI28 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
2210407C18RikQ6YI28 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
2210407C18RikQ6YI28 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
2210407C18RikQ6YI28 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.66■■□□□ 1.38
2210407C18RikQ6YI28 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
2210407C18RikQ6YI28 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
2210407C18RikQ6YI28 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
2210407C18RikQ6YI28 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
2210407C18RikQ6YI28 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
2210407C18RikQ6YI28 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
2210407C18RikQ6YI28 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
2210407C18RikQ6YI28 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
2210407C18RikQ6YI28 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
2210407C18RikQ6YI28 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
2210407C18RikQ6YI28 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
2210407C18RikQ6YI28 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.51■■□□□ 1.35
2210407C18RikQ6YI28 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.5■■□□□ 1.35
2210407C18RikQ6YI28 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
2210407C18RikQ6YI28 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
2210407C18RikQ6YI28 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
2210407C18RikQ6YI28 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
2210407C18RikQ6YI28 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
2210407C18RikQ6YI28 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.44■■□□□ 1.34
2210407C18RikQ6YI28 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
2210407C18RikQ6YI28 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
2210407C18RikQ6YI28 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
2210407C18RikQ6YI28 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
2210407C18RikQ6YI28 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
2210407C18RikQ6YI28 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
2210407C18RikQ6YI28 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
2210407C18RikQ6YI28 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
2210407C18RikQ6YI28 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
2210407C18RikQ6YI28 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
2210407C18RikQ6YI28 Gm26115-201ENSMUST00000175605 87 ntBASIC23.34■■□□□ 1.33
2210407C18RikQ6YI28 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.33■■□□□ 1.33
2210407C18RikQ6YI28 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
2210407C18RikQ6YI28 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.33■■□□□ 1.32
2210407C18RikQ6YI28 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
2210407C18RikQ6YI28 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.27■■□□□ 1.32
2210407C18RikQ6YI28 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
2210407C18RikQ6YI28 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
2210407C18RikQ6YI28 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
2210407C18RikQ6YI28 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
2210407C18RikQ6YI28 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
2210407C18RikQ6YI28 Mipep-204ENSMUST00000225043 1548 ntBASIC23.19■■□□□ 1.3
2210407C18RikQ6YI28 Gm8109-201ENSMUST00000194076 746 ntBASIC23.19■■□□□ 1.3
2210407C18RikQ6YI28 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.18■■□□□ 1.3
2210407C18RikQ6YI28 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
2210407C18RikQ6YI28 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
2210407C18RikQ6YI28 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms