Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,25■■■■□ 3,07
Kdm3aQ6PCM1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34,22■■■■□ 3,07
Kdm3aQ6PCM1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,19■■■■□ 3,06
Kdm3aQ6PCM1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34,16■■■■□ 3,06
Kdm3aQ6PCM1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,12■■■■□ 3,05
Kdm3aQ6PCM1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Kdm3aQ6PCM1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34,1■■■■□ 3,05
Kdm3aQ6PCM1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34,08■■■■□ 3,05
Kdm3aQ6PCM1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34,04■■■■□ 3,04
Kdm3aQ6PCM1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Kdm3aQ6PCM1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34■■■■□ 3,03
Kdm3aQ6PCM1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33,99■■■■□ 3,03
Kdm3aQ6PCM1 Gm26115-201ENSMUST00000175605 87 ntBASIC33,99■■■■□ 3,03
Kdm3aQ6PCM1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33,98■■■■□ 3,03
Kdm3aQ6PCM1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,95■■■■□ 3,03
Kdm3aQ6PCM1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33,91■■■■□ 3,02
Kdm3aQ6PCM1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,88■■■■□ 3,01
Kdm3aQ6PCM1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Kdm3aQ6PCM1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33,81■■■■□ 3
Kdm3aQ6PCM1 Gm8109-201ENSMUST00000194076 746 ntBASIC33,8■■■■□ 3
Kdm3aQ6PCM1 Gm17082-201ENSMUST00000166043 1091 ntBASIC33,76■■■□□ 2,99
Kdm3aQ6PCM1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Kdm3aQ6PCM1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33,7■■■□□ 2,99
Kdm3aQ6PCM1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33,7■■■□□ 2,98
Kdm3aQ6PCM1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,63■■■□□ 2,97
Kdm3aQ6PCM1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33,55■■■□□ 2,96
Kdm3aQ6PCM1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,53■■■□□ 2,96
Kdm3aQ6PCM1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
Kdm3aQ6PCM1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33,52■■■□□ 2,96
Kdm3aQ6PCM1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33,51■■■□□ 2,95
Kdm3aQ6PCM1 Gm27322-201ENSMUST00000184007 104 ntBASIC33,5■■■□□ 2,95
Kdm3aQ6PCM1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Kdm3aQ6PCM1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33,47■■■□□ 2,95
Kdm3aQ6PCM1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33,47■■■□□ 2,95
Kdm3aQ6PCM1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,45■■■□□ 2,95
Kdm3aQ6PCM1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33,44■■■□□ 2,94
Kdm3aQ6PCM1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33,41■■■□□ 2,94
Kdm3aQ6PCM1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,35■■■□□ 2,93
Kdm3aQ6PCM1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33,32■■■□□ 2,92
Kdm3aQ6PCM1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33,31■■■□□ 2,92
Kdm3aQ6PCM1 Zfp131-207ENSMUST00000224946 1783 ntBASIC33,3■■■□□ 2,92
Kdm3aQ6PCM1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,29■■■□□ 2,92
Kdm3aQ6PCM1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33,26■■■□□ 2,91
Kdm3aQ6PCM1 AL845457.1-201ENSMUST00000197244 68 ntBASIC33,26■■■□□ 2,91
Kdm3aQ6PCM1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33,23■■■□□ 2,91
Kdm3aQ6PCM1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
Kdm3aQ6PCM1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33,19■■■□□ 2,9
Kdm3aQ6PCM1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33,18■■■□□ 2,9
Kdm3aQ6PCM1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33,18■■■□□ 2,9
Kdm3aQ6PCM1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33,11■■■□□ 2,89
Kdm3aQ6PCM1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33,11■■■□□ 2,89
Kdm3aQ6PCM1 AC166822.3-201ENSMUST00000227394 661 ntBASIC33,09■■■□□ 2,89
Kdm3aQ6PCM1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33,09■■■□□ 2,89
Kdm3aQ6PCM1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33,09■■■□□ 2,89
Kdm3aQ6PCM1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33,08■■■□□ 2,89
Kdm3aQ6PCM1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33,08■■■□□ 2,89
Kdm3aQ6PCM1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33,02■■■□□ 2,88
Kdm3aQ6PCM1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32,97■■■□□ 2,87
Kdm3aQ6PCM1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,96■■■□□ 2,87
Kdm3aQ6PCM1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32,94■■■□□ 2,86
Kdm3aQ6PCM1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32,91■■■□□ 2,86
Kdm3aQ6PCM1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32,89■■■□□ 2,86
Kdm3aQ6PCM1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Kdm3aQ6PCM1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Kdm3aQ6PCM1 Gm24804-201ENSMUST00000174982 85 ntBASIC32,82■■■□□ 2,84
Kdm3aQ6PCM1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32,8■■■□□ 2,84
Kdm3aQ6PCM1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32,78■■■□□ 2,84
Kdm3aQ6PCM1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32,68■■■□□ 2,82
Kdm3aQ6PCM1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32,68■■■□□ 2,82
Kdm3aQ6PCM1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32,67■■■□□ 2,82
Kdm3aQ6PCM1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,67■■■□□ 2,82
Kdm3aQ6PCM1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32,66■■■□□ 2,82
Kdm3aQ6PCM1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32,65■■■□□ 2,82
Kdm3aQ6PCM1 Mipep-204ENSMUST00000225043 1548 ntBASIC32,64■■■□□ 2,82
Kdm3aQ6PCM1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32,64■■■□□ 2,82
Kdm3aQ6PCM1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32,63■■■□□ 2,81
Kdm3aQ6PCM1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32,57■■■□□ 2,8
Kdm3aQ6PCM1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
Kdm3aQ6PCM1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,54■■■□□ 2,8
Kdm3aQ6PCM1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32,54■■■□□ 2,8
Kdm3aQ6PCM1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32,54■■■□□ 2,8
Kdm3aQ6PCM1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32,52■■■□□ 2,8
Kdm3aQ6PCM1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32,52■■■□□ 2,8
Kdm3aQ6PCM1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32,51■■■□□ 2,8
Kdm3aQ6PCM1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32,51■■■□□ 2,79
Kdm3aQ6PCM1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32,5■■■□□ 2,79
Kdm3aQ6PCM1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32,49■■■□□ 2,79
Kdm3aQ6PCM1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Kdm3aQ6PCM1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32,41■■■□□ 2,78
Kdm3aQ6PCM1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32,39■■■□□ 2,78
Kdm3aQ6PCM1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,39■■■□□ 2,78
Kdm3aQ6PCM1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32,36■■■□□ 2,77
Kdm3aQ6PCM1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Kdm3aQ6PCM1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32,35■■■□□ 2,77
Kdm3aQ6PCM1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32,34■■■□□ 2,77
Kdm3aQ6PCM1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32,34■■■□□ 2,77
Kdm3aQ6PCM1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32,32■■■□□ 2,76
Kdm3aQ6PCM1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Kdm3aQ6PCM1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32,31■■■□□ 2,76
Kdm3aQ6PCM1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms