Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.25■■■■□ 3.07
Kdm3aQ6PCM1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.22■■■■□ 3.07
Kdm3aQ6PCM1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Kdm3aQ6PCM1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.16■■■■□ 3.06
Kdm3aQ6PCM1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Kdm3aQ6PCM1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Kdm3aQ6PCM1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Kdm3aQ6PCM1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.08■■■■□ 3.05
Kdm3aQ6PCM1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Kdm3aQ6PCM1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Kdm3aQ6PCM1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34■■■■□ 3.03
Kdm3aQ6PCM1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.99■■■■□ 3.03
Kdm3aQ6PCM1 Gm26115-201ENSMUST00000175605 87 ntBASIC33.99■■■■□ 3.03
Kdm3aQ6PCM1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Kdm3aQ6PCM1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
Kdm3aQ6PCM1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.91■■■■□ 3.02
Kdm3aQ6PCM1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Kdm3aQ6PCM1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Kdm3aQ6PCM1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
Kdm3aQ6PCM1 Gm8109-201ENSMUST00000194076 746 ntBASIC33.8■■■■□ 3
Kdm3aQ6PCM1 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.76■■■□□ 2.99
Kdm3aQ6PCM1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Kdm3aQ6PCM1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Kdm3aQ6PCM1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.7■■■□□ 2.98
Kdm3aQ6PCM1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Kdm3aQ6PCM1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC33.55■■■□□ 2.96
Kdm3aQ6PCM1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
Kdm3aQ6PCM1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Kdm3aQ6PCM1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
Kdm3aQ6PCM1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.51■■■□□ 2.95
Kdm3aQ6PCM1 Gm27322-201ENSMUST00000184007 104 ntBASIC33.5■■■□□ 2.95
Kdm3aQ6PCM1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Kdm3aQ6PCM1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
Kdm3aQ6PCM1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
Kdm3aQ6PCM1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.45■■■□□ 2.95
Kdm3aQ6PCM1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Kdm3aQ6PCM1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Kdm3aQ6PCM1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.35■■■□□ 2.93
Kdm3aQ6PCM1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Kdm3aQ6PCM1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.31■■■□□ 2.92
Kdm3aQ6PCM1 Zfp131-207ENSMUST00000224946 1783 ntBASIC33.3■■■□□ 2.92
Kdm3aQ6PCM1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Kdm3aQ6PCM1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.26■■■□□ 2.91
Kdm3aQ6PCM1 AL845457.1-201ENSMUST00000197244 68 ntBASIC33.26■■■□□ 2.91
Kdm3aQ6PCM1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Kdm3aQ6PCM1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Kdm3aQ6PCM1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Kdm3aQ6PCM1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Kdm3aQ6PCM1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33.18■■■□□ 2.9
Kdm3aQ6PCM1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Kdm3aQ6PCM1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Kdm3aQ6PCM1 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.09■■■□□ 2.89
Kdm3aQ6PCM1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Kdm3aQ6PCM1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Kdm3aQ6PCM1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Kdm3aQ6PCM1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.08■■■□□ 2.89
Kdm3aQ6PCM1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Kdm3aQ6PCM1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Kdm3aQ6PCM1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Kdm3aQ6PCM1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Kdm3aQ6PCM1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Kdm3aQ6PCM1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.89■■■□□ 2.86
Kdm3aQ6PCM1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Kdm3aQ6PCM1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Kdm3aQ6PCM1 Gm24804-201ENSMUST00000174982 85 ntBASIC32.82■■■□□ 2.84
Kdm3aQ6PCM1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Kdm3aQ6PCM1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Kdm3aQ6PCM1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Kdm3aQ6PCM1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.68■■■□□ 2.82
Kdm3aQ6PCM1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Kdm3aQ6PCM1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Kdm3aQ6PCM1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Kdm3aQ6PCM1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
Kdm3aQ6PCM1 Mipep-204ENSMUST00000225043 1548 ntBASIC32.64■■■□□ 2.82
Kdm3aQ6PCM1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Kdm3aQ6PCM1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Kdm3aQ6PCM1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Kdm3aQ6PCM1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Kdm3aQ6PCM1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Kdm3aQ6PCM1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
Kdm3aQ6PCM1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Kdm3aQ6PCM1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Kdm3aQ6PCM1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Kdm3aQ6PCM1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Kdm3aQ6PCM1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Kdm3aQ6PCM1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Kdm3aQ6PCM1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Kdm3aQ6PCM1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Kdm3aQ6PCM1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Kdm3aQ6PCM1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Kdm3aQ6PCM1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Kdm3aQ6PCM1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Kdm3aQ6PCM1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Kdm3aQ6PCM1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.35■■■□□ 2.77
Kdm3aQ6PCM1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.34■■■□□ 2.77
Kdm3aQ6PCM1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Kdm3aQ6PCM1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Kdm3aQ6PCM1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Kdm3aQ6PCM1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Kdm3aQ6PCM1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms