Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Shroom1Q5SX79 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.75■■■□□ 2.35
Shroom1Q5SX79 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Shroom1Q5SX79 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.68■■■□□ 2.34
Shroom1Q5SX79 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
Shroom1Q5SX79 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Shroom1Q5SX79 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.65■■■□□ 2.34
Shroom1Q5SX79 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Shroom1Q5SX79 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.57■■■□□ 2.32
Shroom1Q5SX79 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.55■■■□□ 2.32
Shroom1Q5SX79 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Shroom1Q5SX79 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.55■■■□□ 2.32
Shroom1Q5SX79 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Shroom1Q5SX79 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Shroom1Q5SX79 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Shroom1Q5SX79 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Shroom1Q5SX79 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.38■■■□□ 2.29
Shroom1Q5SX79 Gm27322-201ENSMUST00000184007 104 ntBASIC29.37■■■□□ 2.29
Shroom1Q5SX79 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Shroom1Q5SX79 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
Shroom1Q5SX79 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom1Q5SX79 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Shroom1Q5SX79 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom1Q5SX79 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom1Q5SX79 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Shroom1Q5SX79 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.18■■■□□ 2.26
Shroom1Q5SX79 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom1Q5SX79 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Shroom1Q5SX79 Gm24804-201ENSMUST00000174982 85 ntBASIC29.12■■■□□ 2.25
Shroom1Q5SX79 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Shroom1Q5SX79 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Shroom1Q5SX79 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Shroom1Q5SX79 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Shroom1Q5SX79 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Shroom1Q5SX79 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Shroom1Q5SX79 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Shroom1Q5SX79 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.02■■■□□ 2.24
Shroom1Q5SX79 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Shroom1Q5SX79 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.02■■■□□ 2.24
Shroom1Q5SX79 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Shroom1Q5SX79 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.99■■■□□ 2.23
Shroom1Q5SX79 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Shroom1Q5SX79 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
Shroom1Q5SX79 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Shroom1Q5SX79 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Shroom1Q5SX79 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Shroom1Q5SX79 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
Shroom1Q5SX79 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Shroom1Q5SX79 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.79■■■□□ 2.2
Shroom1Q5SX79 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.78■■■□□ 2.2
Shroom1Q5SX79 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Shroom1Q5SX79 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.73■■■□□ 2.19
Shroom1Q5SX79 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom1Q5SX79 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
Shroom1Q5SX79 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom1Q5SX79 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Shroom1Q5SX79 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom1Q5SX79 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shroom1Q5SX79 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Shroom1Q5SX79 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Shroom1Q5SX79 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Shroom1Q5SX79 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shroom1Q5SX79 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Shroom1Q5SX79 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Shroom1Q5SX79 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom1Q5SX79 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shroom1Q5SX79 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.53■■■□□ 2.16
Shroom1Q5SX79 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shroom1Q5SX79 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Shroom1Q5SX79 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Shroom1Q5SX79 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom1Q5SX79 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom1Q5SX79 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom1Q5SX79 Zfp131-205ENSMUST00000223812 663 ntBASIC28.45■■■□□ 2.14
Shroom1Q5SX79 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shroom1Q5SX79 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.43■■■□□ 2.14
Shroom1Q5SX79 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Shroom1Q5SX79 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Shroom1Q5SX79 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Shroom1Q5SX79 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
Shroom1Q5SX79 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shroom1Q5SX79 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom1Q5SX79 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shroom1Q5SX79 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shroom1Q5SX79 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Shroom1Q5SX79 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shroom1Q5SX79 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
Shroom1Q5SX79 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom1Q5SX79 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Shroom1Q5SX79 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Shroom1Q5SX79 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom1Q5SX79 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom1Q5SX79 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.15■■■□□ 2.1
Shroom1Q5SX79 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Shroom1Q5SX79 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Shroom1Q5SX79 Gm16148-201ENSMUST00000119653 893 ntBASIC28.12■■■□□ 2.09
Shroom1Q5SX79 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shroom1Q5SX79 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Shroom1Q5SX79 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.1■■■□□ 2.09
Shroom1Q5SX79 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.1■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms