Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Gm27322-201ENSMUST00000184007 104 ntBASIC17.52■□□□□ 0.4
Abca13Q5SSE9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abca13Q5SSE9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.47■□□□□ 0.39
Abca13Q5SSE9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca13Q5SSE9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca13Q5SSE9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abca13Q5SSE9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abca13Q5SSE9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca13Q5SSE9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abca13Q5SSE9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca13Q5SSE9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca13Q5SSE9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.38■□□□□ 0.37
Abca13Q5SSE9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.36■□□□□ 0.37
Abca13Q5SSE9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.36■□□□□ 0.37
Abca13Q5SSE9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Abca13Q5SSE9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Abca13Q5SSE9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca13Q5SSE9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca13Q5SSE9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca13Q5SSE9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Abca13Q5SSE9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.29■□□□□ 0.36
Abca13Q5SSE9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.29■□□□□ 0.36
Abca13Q5SSE9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Abca13Q5SSE9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.24■□□□□ 0.35
Abca13Q5SSE9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abca13Q5SSE9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.17■□□□□ 0.34
Abca13Q5SSE9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Abca13Q5SSE9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abca13Q5SSE9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abca13Q5SSE9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Abca13Q5SSE9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abca13Q5SSE9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Abca13Q5SSE9 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.09■□□□□ 0.33
Abca13Q5SSE9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abca13Q5SSE9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Abca13Q5SSE9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.06■□□□□ 0.32
Abca13Q5SSE9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Abca13Q5SSE9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.04■□□□□ 0.32
Abca13Q5SSE9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca13Q5SSE9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca13Q5SSE9 Gm15039-201ENSMUST00000118914 875 ntBASIC17.02■□□□□ 0.32
Abca13Q5SSE9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Abca13Q5SSE9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Abca13Q5SSE9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Abca13Q5SSE9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.01■□□□□ 0.31
Abca13Q5SSE9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca13Q5SSE9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abca13Q5SSE9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca13Q5SSE9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.99■□□□□ 0.31
Abca13Q5SSE9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abca13Q5SSE9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.96■□□□□ 0.31
Abca13Q5SSE9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Abca13Q5SSE9 Gm45855-201ENSMUST00000212546 880 ntBASIC16.94■□□□□ 0.3
Abca13Q5SSE9 Psd-208ENSMUST00000224556 2034 ntBASIC16.92■□□□□ 0.3
Abca13Q5SSE9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca13Q5SSE9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Abca13Q5SSE9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Abca13Q5SSE9 Gm16148-201ENSMUST00000119653 893 ntBASIC16.9■□□□□ 0.3
Abca13Q5SSE9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abca13Q5SSE9 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.88■□□□□ 0.29
Abca13Q5SSE9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abca13Q5SSE9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Abca13Q5SSE9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Abca13Q5SSE9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Abca13Q5SSE9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abca13Q5SSE9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca13Q5SSE9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abca13Q5SSE9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abca13Q5SSE9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca13Q5SSE9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Abca13Q5SSE9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca13Q5SSE9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abca13Q5SSE9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca13Q5SSE9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Abca13Q5SSE9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca13Q5SSE9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Abca13Q5SSE9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Abca13Q5SSE9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca13Q5SSE9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Abca13Q5SSE9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca13Q5SSE9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Abca13Q5SSE9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Abca13Q5SSE9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.72■□□□□ 0.27
Abca13Q5SSE9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.69■□□□□ 0.26
Abca13Q5SSE9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Abca13Q5SSE9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abca13Q5SSE9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca13Q5SSE9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
Abca13Q5SSE9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca13Q5SSE9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.63■□□□□ 0.25
Abca13Q5SSE9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abca13Q5SSE9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca13Q5SSE9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca13Q5SSE9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.6■□□□□ 0.25
Abca13Q5SSE9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abca13Q5SSE9 Gm9397-201ENSMUST00000200125 605 ntBASIC16.59■□□□□ 0.25
Abca13Q5SSE9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Abca13Q5SSE9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca13Q5SSE9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca13Q5SSE9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms