Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Shisa6Q3UH99 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.81■■□□□ 1.72
Shisa6Q3UH99 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Shisa6Q3UH99 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.77■■□□□ 1.72
Shisa6Q3UH99 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Shisa6Q3UH99 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
Shisa6Q3UH99 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Shisa6Q3UH99 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Shisa6Q3UH99 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shisa6Q3UH99 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.64■■□□□ 1.7
Shisa6Q3UH99 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shisa6Q3UH99 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shisa6Q3UH99 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.53■■□□□ 1.68
Shisa6Q3UH99 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Shisa6Q3UH99 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Shisa6Q3UH99 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shisa6Q3UH99 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.46■■□□□ 1.67
Shisa6Q3UH99 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
Shisa6Q3UH99 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shisa6Q3UH99 Gm27322-201ENSMUST00000184007 104 ntBASIC25.42■■□□□ 1.66
Shisa6Q3UH99 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shisa6Q3UH99 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa6Q3UH99 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shisa6Q3UH99 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shisa6Q3UH99 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Shisa6Q3UH99 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shisa6Q3UH99 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Shisa6Q3UH99 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Shisa6Q3UH99 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Shisa6Q3UH99 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Shisa6Q3UH99 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.2■■□□□ 1.62
Shisa6Q3UH99 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Shisa6Q3UH99 Gm24804-201ENSMUST00000174982 85 ntBASIC25.19■■□□□ 1.62
Shisa6Q3UH99 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.15■■□□□ 1.62
Shisa6Q3UH99 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Shisa6Q3UH99 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shisa6Q3UH99 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Shisa6Q3UH99 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shisa6Q3UH99 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.09■■□□□ 1.61
Shisa6Q3UH99 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shisa6Q3UH99 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shisa6Q3UH99 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Shisa6Q3UH99 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Shisa6Q3UH99 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Shisa6Q3UH99 AL845457.1-201ENSMUST00000197244 68 ntBASIC25■■□□□ 1.59
Shisa6Q3UH99 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25■■□□□ 1.59
Shisa6Q3UH99 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.99■■□□□ 1.59
Shisa6Q3UH99 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Shisa6Q3UH99 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shisa6Q3UH99 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Shisa6Q3UH99 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Shisa6Q3UH99 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.93■■□□□ 1.58
Shisa6Q3UH99 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shisa6Q3UH99 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.92■■□□□ 1.58
Shisa6Q3UH99 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Shisa6Q3UH99 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Shisa6Q3UH99 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.83■■□□□ 1.57
Shisa6Q3UH99 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shisa6Q3UH99 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.76■■□□□ 1.55
Shisa6Q3UH99 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Shisa6Q3UH99 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shisa6Q3UH99 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Shisa6Q3UH99 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Shisa6Q3UH99 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Shisa6Q3UH99 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.71■■□□□ 1.55
Shisa6Q3UH99 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa6Q3UH99 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa6Q3UH99 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Shisa6Q3UH99 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shisa6Q3UH99 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa6Q3UH99 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Shisa6Q3UH99 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Shisa6Q3UH99 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Shisa6Q3UH99 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shisa6Q3UH99 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Shisa6Q3UH99 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Shisa6Q3UH99 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Shisa6Q3UH99 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Shisa6Q3UH99 Zfp131-205ENSMUST00000223812 663 ntBASIC24.48■■□□□ 1.51
Shisa6Q3UH99 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Shisa6Q3UH99 Mipep-204ENSMUST00000225043 1548 ntBASIC24.46■■□□□ 1.51
Shisa6Q3UH99 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Shisa6Q3UH99 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Shisa6Q3UH99 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Shisa6Q3UH99 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Shisa6Q3UH99 Peli2-204ENSMUST00000226513 1320 ntBASIC24.4■■□□□ 1.5
Shisa6Q3UH99 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Shisa6Q3UH99 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Shisa6Q3UH99 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Shisa6Q3UH99 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Shisa6Q3UH99 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa6Q3UH99 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Shisa6Q3UH99 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shisa6Q3UH99 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.35■■□□□ 1.49
Shisa6Q3UH99 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Shisa6Q3UH99 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shisa6Q3UH99 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Shisa6Q3UH99 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shisa6Q3UH99 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.32■■□□□ 1.48
Shisa6Q3UH99 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms