Protein–RNA interactions for Protein: Q3U1Y4

Dennd4b, DENN domain-containing protein 4B, mousemouse

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dennd4bQ3U1Y4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC42.41■■■■■ 4.38
Dennd4bQ3U1Y4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC42.38■■■■■ 4.37
Dennd4bQ3U1Y4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC42.33■■■■■ 4.37
Dennd4bQ3U1Y4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC42.28■■■■■ 4.36
Dennd4bQ3U1Y4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC42.26■■■■■ 4.36
Dennd4bQ3U1Y4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC42.24■■■■■ 4.35
Dennd4bQ3U1Y4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC42.24■■■■■ 4.35
Dennd4bQ3U1Y4 Gm42596-201ENSMUST00000196305 1958 ntBASIC42.23■■■■■ 4.35
Dennd4bQ3U1Y4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC42.22■■■■■ 4.35
Dennd4bQ3U1Y4 Gm27322-201ENSMUST00000184007 104 ntBASIC42.17■■■■■ 4.34
Dennd4bQ3U1Y4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC42.17■■■■■ 4.34
Dennd4bQ3U1Y4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC42.12■■■■■ 4.33
Dennd4bQ3U1Y4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC42.1■■■■■ 4.33
Dennd4bQ3U1Y4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC42.08■■■■■ 4.33
Dennd4bQ3U1Y4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC42.05■■■■■ 4.32
Dennd4bQ3U1Y4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC42.04■■■■■ 4.32
Dennd4bQ3U1Y4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC42.03■■■■■ 4.32
Dennd4bQ3U1Y4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41.98■■■■■ 4.31
Dennd4bQ3U1Y4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
Dennd4bQ3U1Y4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41.93■■■■■ 4.3
Dennd4bQ3U1Y4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC41.92■■■■■ 4.3
Dennd4bQ3U1Y4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41.9■■■■■ 4.3
Dennd4bQ3U1Y4 Zfp131-205ENSMUST00000223812 663 ntBASIC41.89■■■■■ 4.3
Dennd4bQ3U1Y4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
Dennd4bQ3U1Y4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC41.74■■■■■ 4.27
Dennd4bQ3U1Y4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC41.74■■■■■ 4.27
Dennd4bQ3U1Y4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41.66■■■■■ 4.26
Dennd4bQ3U1Y4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC41.59■■■■■ 4.25
Dennd4bQ3U1Y4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC41.59■■■■■ 4.25
Dennd4bQ3U1Y4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
Dennd4bQ3U1Y4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
Dennd4bQ3U1Y4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC41.48■■■■■ 4.23
Dennd4bQ3U1Y4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
Dennd4bQ3U1Y4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC41.45■■■■■ 4.23
Dennd4bQ3U1Y4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
Dennd4bQ3U1Y4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
Dennd4bQ3U1Y4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.21
Dennd4bQ3U1Y4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
Dennd4bQ3U1Y4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC41.34■■■■■ 4.21
Dennd4bQ3U1Y4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
Dennd4bQ3U1Y4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC41.33■■■■■ 4.21
Dennd4bQ3U1Y4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
Dennd4bQ3U1Y4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC41.31■■■■■ 4.2
Dennd4bQ3U1Y4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
Dennd4bQ3U1Y4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC41.24■■■■■ 4.19
Dennd4bQ3U1Y4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC41.24■■■■■ 4.19
Dennd4bQ3U1Y4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
Dennd4bQ3U1Y4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC41.2■■■■■ 4.19
Dennd4bQ3U1Y4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC41.18■■■■■ 4.18
Dennd4bQ3U1Y4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
Dennd4bQ3U1Y4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC41.09■■■■■ 4.17
Dennd4bQ3U1Y4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
Dennd4bQ3U1Y4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Dennd4bQ3U1Y4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
Dennd4bQ3U1Y4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC41.05■■■■■ 4.16
Dennd4bQ3U1Y4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC41.04■■■■■ 4.16
Dennd4bQ3U1Y4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC41.02■■■■■ 4.16
Dennd4bQ3U1Y4 AC166822.3-201ENSMUST00000227394 661 ntBASIC41.02■■■■■ 4.16
Dennd4bQ3U1Y4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC40.98■■■■■ 4.15
Dennd4bQ3U1Y4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Dennd4bQ3U1Y4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC40.92■■■■■ 4.14
Dennd4bQ3U1Y4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC40.89■■■■■ 4.14
Dennd4bQ3U1Y4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Dennd4bQ3U1Y4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40.76■■■■■ 4.12
Dennd4bQ3U1Y4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC40.76■■■■■ 4.11
Dennd4bQ3U1Y4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC40.73■■■■■ 4.11
Dennd4bQ3U1Y4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
Dennd4bQ3U1Y4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.71■■■■■ 4.11
Dennd4bQ3U1Y4 AL845457.1-201ENSMUST00000197244 68 ntBASIC40.7■■■■■ 4.11
Dennd4bQ3U1Y4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC40.68■■■■■ 4.1
Dennd4bQ3U1Y4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40.61■■■■■ 4.09
Dennd4bQ3U1Y4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
Dennd4bQ3U1Y4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Dennd4bQ3U1Y4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Dennd4bQ3U1Y4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
Dennd4bQ3U1Y4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC40.5■■■■■ 4.07
Dennd4bQ3U1Y4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC40.5■■■■■ 4.07
Dennd4bQ3U1Y4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC40.49■■■■■ 4.07
Dennd4bQ3U1Y4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
Dennd4bQ3U1Y4 Gm16148-201ENSMUST00000119653 893 ntBASIC40.47■■■■■ 4.07
Dennd4bQ3U1Y4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
Dennd4bQ3U1Y4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC40.43■■■■■ 4.06
Dennd4bQ3U1Y4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC40.42■■■■■ 4.06
Dennd4bQ3U1Y4 Tdp2-203ENSMUST00000223804 1136 ntBASIC40.42■■■■■ 4.06
Dennd4bQ3U1Y4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40.41■■■■■ 4.06
Dennd4bQ3U1Y4 Zfp131-207ENSMUST00000224946 1783 ntBASIC40.4■■■■■ 4.06
Dennd4bQ3U1Y4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Dennd4bQ3U1Y4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC40.35■■■■■ 4.05
Dennd4bQ3U1Y4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
Dennd4bQ3U1Y4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
Dennd4bQ3U1Y4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Dennd4bQ3U1Y4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC40.32■■■■■ 4.05
Dennd4bQ3U1Y4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC40.2■■■■■ 4.03
Dennd4bQ3U1Y4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
Dennd4bQ3U1Y4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC40.2■■■■■ 4.03
Dennd4bQ3U1Y4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC40.19■■■■■ 4.02
Dennd4bQ3U1Y4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
Dennd4bQ3U1Y4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC40.14■■■■■ 4.02
Dennd4bQ3U1Y4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC40.13■■■■■ 4.02
Dennd4bQ3U1Y4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC40.12■■■■■ 4.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms