Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.5■■■□□ 2.95
Lins1Q3U1D0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Lins1Q3U1D0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Lins1Q3U1D0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.45■■■□□ 2.95
Lins1Q3U1D0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.43■■■□□ 2.94
Lins1Q3U1D0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Lins1Q3U1D0 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.39■■■□□ 2.94
Lins1Q3U1D0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.38■■■□□ 2.93
Lins1Q3U1D0 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.37■■■□□ 2.93
Lins1Q3U1D0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Lins1Q3U1D0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Lins1Q3U1D0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Lins1Q3U1D0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.25■■■□□ 2.91
Lins1Q3U1D0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Lins1Q3U1D0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Lins1Q3U1D0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.15■■■□□ 2.9
Lins1Q3U1D0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
Lins1Q3U1D0 Gm27322-201ENSMUST00000184007 104 ntBASIC33.13■■■□□ 2.89
Lins1Q3U1D0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Lins1Q3U1D0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Lins1Q3U1D0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Lins1Q3U1D0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Lins1Q3U1D0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
Lins1Q3U1D0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.96■■■□□ 2.87
Lins1Q3U1D0 Gm24804-201ENSMUST00000174982 85 ntBASIC32.89■■■□□ 2.86
Lins1Q3U1D0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Lins1Q3U1D0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Lins1Q3U1D0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Lins1Q3U1D0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Lins1Q3U1D0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Lins1Q3U1D0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Lins1Q3U1D0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Lins1Q3U1D0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.73■■■□□ 2.83
Lins1Q3U1D0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.72■■■□□ 2.83
Lins1Q3U1D0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Lins1Q3U1D0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.7■■■□□ 2.83
Lins1Q3U1D0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Lins1Q3U1D0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Lins1Q3U1D0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
Lins1Q3U1D0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
Lins1Q3U1D0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Lins1Q3U1D0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Lins1Q3U1D0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Lins1Q3U1D0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
Lins1Q3U1D0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Lins1Q3U1D0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
Lins1Q3U1D0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
Lins1Q3U1D0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Lins1Q3U1D0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.41■■■□□ 2.78
Lins1Q3U1D0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
Lins1Q3U1D0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Lins1Q3U1D0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Lins1Q3U1D0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Lins1Q3U1D0 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.38■■■□□ 2.77
Lins1Q3U1D0 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.38■■■□□ 2.77
Lins1Q3U1D0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Lins1Q3U1D0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Lins1Q3U1D0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Lins1Q3U1D0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Lins1Q3U1D0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lins1Q3U1D0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Lins1Q3U1D0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Lins1Q3U1D0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Lins1Q3U1D0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Lins1Q3U1D0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Lins1Q3U1D0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.2■■■□□ 2.75
Lins1Q3U1D0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Lins1Q3U1D0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Lins1Q3U1D0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.73
Lins1Q3U1D0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Lins1Q3U1D0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Lins1Q3U1D0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Lins1Q3U1D0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Lins1Q3U1D0 Zfp131-205ENSMUST00000223812 663 ntBASIC32.07■■■□□ 2.72
Lins1Q3U1D0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Lins1Q3U1D0 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.06■■■□□ 2.72
Lins1Q3U1D0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Lins1Q3U1D0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Lins1Q3U1D0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Lins1Q3U1D0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
Lins1Q3U1D0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Lins1Q3U1D0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Lins1Q3U1D0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Lins1Q3U1D0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Lins1Q3U1D0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Lins1Q3U1D0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Lins1Q3U1D0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.81■■■□□ 2.68
Lins1Q3U1D0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Lins1Q3U1D0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Lins1Q3U1D0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Lins1Q3U1D0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Lins1Q3U1D0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.75■■■□□ 2.67
Lins1Q3U1D0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Lins1Q3U1D0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Lins1Q3U1D0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.72■■■□□ 2.67
Lins1Q3U1D0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Lins1Q3U1D0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Lins1Q3U1D0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
Lins1Q3U1D0 Gm16148-201ENSMUST00000119653 893 ntBASIC31.69■■■□□ 2.66
Lins1Q3U1D0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms