Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smim6Q3U0I6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smim6Q3U0I6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim6Q3U0I6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Smim6Q3U0I6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smim6Q3U0I6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim6Q3U0I6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smim6Q3U0I6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smim6Q3U0I6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smim6Q3U0I6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smim6Q3U0I6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Smim6Q3U0I6 Gm24109-201ENSMUST00000175489 103 ntBASIC21.14■□□□□ 0.97
Smim6Q3U0I6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.14■□□□□ 0.97
Smim6Q3U0I6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smim6Q3U0I6 Gm23366-201ENSMUST00000175022 89 ntBASIC21.08■□□□□ 0.97
Smim6Q3U0I6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smim6Q3U0I6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smim6Q3U0I6 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.05■□□□□ 0.96
Smim6Q3U0I6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.03■□□□□ 0.96
Smim6Q3U0I6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smim6Q3U0I6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smim6Q3U0I6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smim6Q3U0I6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smim6Q3U0I6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smim6Q3U0I6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smim6Q3U0I6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.96■□□□□ 0.95
Smim6Q3U0I6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smim6Q3U0I6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim6Q3U0I6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim6Q3U0I6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smim6Q3U0I6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim6Q3U0I6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.89■□□□□ 0.93
Smim6Q3U0I6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smim6Q3U0I6 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.88■□□□□ 0.93
Smim6Q3U0I6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smim6Q3U0I6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smim6Q3U0I6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smim6Q3U0I6 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.82■□□□□ 0.92
Smim6Q3U0I6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smim6Q3U0I6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.78■□□□□ 0.92
Smim6Q3U0I6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.78■□□□□ 0.92
Smim6Q3U0I6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smim6Q3U0I6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim6Q3U0I6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim6Q3U0I6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim6Q3U0I6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smim6Q3U0I6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smim6Q3U0I6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smim6Q3U0I6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smim6Q3U0I6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim6Q3U0I6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim6Q3U0I6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smim6Q3U0I6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim6Q3U0I6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smim6Q3U0I6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim6Q3U0I6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim6Q3U0I6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smim6Q3U0I6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smim6Q3U0I6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim6Q3U0I6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smim6Q3U0I6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smim6Q3U0I6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smim6Q3U0I6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smim6Q3U0I6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smim6Q3U0I6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim6Q3U0I6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim6Q3U0I6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smim6Q3U0I6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smim6Q3U0I6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smim6Q3U0I6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smim6Q3U0I6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smim6Q3U0I6 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.48■□□□□ 0.87
Smim6Q3U0I6 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.47■□□□□ 0.87
Smim6Q3U0I6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smim6Q3U0I6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smim6Q3U0I6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smim6Q3U0I6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smim6Q3U0I6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smim6Q3U0I6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smim6Q3U0I6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smim6Q3U0I6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Smim6Q3U0I6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smim6Q3U0I6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smim6Q3U0I6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smim6Q3U0I6 Zxda-201ENSMUST00000117281 2621 ntBASIC20.38■□□□□ 0.85
Smim6Q3U0I6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smim6Q3U0I6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.37■□□□□ 0.85
Smim6Q3U0I6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.37■□□□□ 0.85
Smim6Q3U0I6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smim6Q3U0I6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim6Q3U0I6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim6Q3U0I6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim6Q3U0I6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim6Q3U0I6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smim6Q3U0I6 Gm27325-201ENSMUST00000175467 74 ntBASIC20.34■□□□□ 0.85
Smim6Q3U0I6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smim6Q3U0I6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.32■□□□□ 0.84
Smim6Q3U0I6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.32■□□□□ 0.84
Smim6Q3U0I6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smim6Q3U0I6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms