Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Nell1Q2VWQ2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.22■■□□□ 1.95
Nell1Q2VWQ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.19■■□□□ 1.94
Nell1Q2VWQ2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Nell1Q2VWQ2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Nell1Q2VWQ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Nell1Q2VWQ2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.14■■□□□ 1.94
Nell1Q2VWQ2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Nell1Q2VWQ2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Nell1Q2VWQ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Nell1Q2VWQ2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Nell1Q2VWQ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Nell1Q2VWQ2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Nell1Q2VWQ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Nell1Q2VWQ2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Nell1Q2VWQ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Nell1Q2VWQ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Nell1Q2VWQ2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.99■■□□□ 1.91
Nell1Q2VWQ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.98■■□□□ 1.91
Nell1Q2VWQ2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Nell1Q2VWQ2 Zfp131-205ENSMUST00000223812 663 ntBASIC26.92■■□□□ 1.9
Nell1Q2VWQ2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Nell1Q2VWQ2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Nell1Q2VWQ2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Nell1Q2VWQ2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Nell1Q2VWQ2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Nell1Q2VWQ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Nell1Q2VWQ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.78■■□□□ 1.88
Nell1Q2VWQ2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Nell1Q2VWQ2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.78■■□□□ 1.88
Nell1Q2VWQ2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Nell1Q2VWQ2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.74■■□□□ 1.87
Nell1Q2VWQ2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.73■■□□□ 1.87
Nell1Q2VWQ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Nell1Q2VWQ2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Nell1Q2VWQ2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Nell1Q2VWQ2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nell1Q2VWQ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Nell1Q2VWQ2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.63■■□□□ 1.85
Nell1Q2VWQ2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Nell1Q2VWQ2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Nell1Q2VWQ2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.61■■□□□ 1.85
Nell1Q2VWQ2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Nell1Q2VWQ2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nell1Q2VWQ2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Nell1Q2VWQ2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nell1Q2VWQ2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Nell1Q2VWQ2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Nell1Q2VWQ2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.5■■□□□ 1.83
Nell1Q2VWQ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.5■■□□□ 1.83
Nell1Q2VWQ2 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.49■■□□□ 1.83
Nell1Q2VWQ2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nell1Q2VWQ2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Nell1Q2VWQ2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nell1Q2VWQ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Nell1Q2VWQ2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nell1Q2VWQ2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nell1Q2VWQ2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nell1Q2VWQ2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nell1Q2VWQ2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nell1Q2VWQ2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Nell1Q2VWQ2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Nell1Q2VWQ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.24■■□□□ 1.79
Nell1Q2VWQ2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Nell1Q2VWQ2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nell1Q2VWQ2 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.22■■□□□ 1.79
Nell1Q2VWQ2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nell1Q2VWQ2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Nell1Q2VWQ2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nell1Q2VWQ2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.2■■□□□ 1.78
Nell1Q2VWQ2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nell1Q2VWQ2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nell1Q2VWQ2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nell1Q2VWQ2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nell1Q2VWQ2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Nell1Q2VWQ2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nell1Q2VWQ2 Gm16148-201ENSMUST00000119653 893 ntBASIC26.12■■□□□ 1.77
Nell1Q2VWQ2 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.11■■□□□ 1.77
Nell1Q2VWQ2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Nell1Q2VWQ2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nell1Q2VWQ2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.07■■□□□ 1.76
Nell1Q2VWQ2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nell1Q2VWQ2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nell1Q2VWQ2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.03■■□□□ 1.76
Nell1Q2VWQ2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nell1Q2VWQ2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Nell1Q2VWQ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nell1Q2VWQ2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nell1Q2VWQ2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Nell1Q2VWQ2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
Nell1Q2VWQ2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Nell1Q2VWQ2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nell1Q2VWQ2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nell1Q2VWQ2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Nell1Q2VWQ2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Nell1Q2VWQ2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Nell1Q2VWQ2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nell1Q2VWQ2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.86■■□□□ 1.73
Nell1Q2VWQ2 Peli2-204ENSMUST00000226513 1320 ntBASIC25.86■■□□□ 1.73
Nell1Q2VWQ2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms