Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.94■■□□□ 1.1
Sssca1P56873 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sssca1P56873 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sssca1P56873 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.9■■□□□ 1.1
Sssca1P56873 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sssca1P56873 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sssca1P56873 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.87■■□□□ 1.09
Sssca1P56873 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sssca1P56873 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sssca1P56873 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sssca1P56873 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sssca1P56873 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sssca1P56873 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sssca1P56873 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sssca1P56873 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sssca1P56873 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.7■■□□□ 1.07
Sssca1P56873 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sssca1P56873 Gm25238-201ENSMUST00000174914 89 ntBASIC21.68■■□□□ 1.06
Sssca1P56873 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.68■■□□□ 1.06
Sssca1P56873 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.68■■□□□ 1.06
Sssca1P56873 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sssca1P56873 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sssca1P56873 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sssca1P56873 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sssca1P56873 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.62■■□□□ 1.05
Sssca1P56873 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sssca1P56873 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Sssca1P56873 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sssca1P56873 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sssca1P56873 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Sssca1P56873 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sssca1P56873 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sssca1P56873 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sssca1P56873 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.47■■□□□ 1.03
Sssca1P56873 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sssca1P56873 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.46■■□□□ 1.03
Sssca1P56873 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.44■■□□□ 1.02
Sssca1P56873 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sssca1P56873 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sssca1P56873 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.35■■□□□ 1.01
Sssca1P56873 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.34■■□□□ 1.01
Sssca1P56873 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sssca1P56873 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Sssca1P56873 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Sssca1P56873 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sssca1P56873 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sssca1P56873 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Sssca1P56873 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sssca1P56873 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sssca1P56873 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.28■■□□□ 1
Sssca1P56873 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sssca1P56873 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sssca1P56873 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sssca1P56873 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sssca1P56873 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sssca1P56873 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sssca1P56873 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sssca1P56873 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sssca1P56873 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.22■□□□□ 0.99
Sssca1P56873 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.21■□□□□ 0.99
Sssca1P56873 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.19■□□□□ 0.98
Sssca1P56873 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.18■□□□□ 0.98
Sssca1P56873 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sssca1P56873 Rab21-202ENSMUST00000218831 843 ntBASIC21.17■□□□□ 0.98
Sssca1P56873 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sssca1P56873 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sssca1P56873 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
Sssca1P56873 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.12■□□□□ 0.97
Sssca1P56873 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sssca1P56873 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sssca1P56873 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sssca1P56873 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sssca1P56873 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sssca1P56873 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.06■□□□□ 0.96
Sssca1P56873 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sssca1P56873 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sssca1P56873 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sssca1P56873 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sssca1P56873 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sssca1P56873 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sssca1P56873 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.01■□□□□ 0.95
Sssca1P56873 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sssca1P56873 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sssca1P56873 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sssca1P56873 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sssca1P56873 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sssca1P56873 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sssca1P56873 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sssca1P56873 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Sssca1P56873 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sssca1P56873 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sssca1P56873 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sssca1P56873 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.91■□□□□ 0.94
Sssca1P56873 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sssca1P56873 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sssca1P56873 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sssca1P56873 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sssca1P56873 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sssca1P56873 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sssca1P56873 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms