Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.09■■■□□ 2.25
Ddx6P54823 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
Ddx6P54823 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ddx6P54823 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ddx6P54823 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.95■■■□□ 2.22
Ddx6P54823 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx6P54823 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx6P54823 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx6P54823 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ddx6P54823 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ddx6P54823 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Ddx6P54823 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx6P54823 Gm27322-201ENSMUST00000184007 104 ntBASIC28.76■■■□□ 2.19
Ddx6P54823 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.76■■■□□ 2.19
Ddx6P54823 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Ddx6P54823 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx6P54823 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ddx6P54823 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ddx6P54823 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx6P54823 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.54■■■□□ 2.16
Ddx6P54823 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ddx6P54823 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ddx6P54823 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.44■■■□□ 2.14
Ddx6P54823 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx6P54823 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Ddx6P54823 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.39■■■□□ 2.14
Ddx6P54823 Gm24804-201ENSMUST00000174982 85 ntBASIC28.38■■■□□ 2.13
Ddx6P54823 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx6P54823 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx6P54823 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ddx6P54823 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ddx6P54823 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.32■■■□□ 2.12
Ddx6P54823 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ddx6P54823 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Ddx6P54823 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ddx6P54823 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ddx6P54823 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ddx6P54823 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Ddx6P54823 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ddx6P54823 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.2■■■□□ 2.1
Ddx6P54823 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.2■■■□□ 2.1
Ddx6P54823 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.16■■■□□ 2.1
Ddx6P54823 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ddx6P54823 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ddx6P54823 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx6P54823 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx6P54823 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ddx6P54823 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ddx6P54823 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Ddx6P54823 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
Ddx6P54823 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ddx6P54823 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ddx6P54823 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ddx6P54823 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.96■■■□□ 2.07
Ddx6P54823 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ddx6P54823 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Ddx6P54823 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx6P54823 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx6P54823 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Ddx6P54823 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx6P54823 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.83■■■□□ 2.05
Ddx6P54823 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ddx6P54823 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx6P54823 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx6P54823 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.74■■■□□ 2.03
Ddx6P54823 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Ddx6P54823 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx6P54823 Zfp131-205ENSMUST00000223812 663 ntBASIC27.7■■■□□ 2.02
Ddx6P54823 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx6P54823 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx6P54823 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Ddx6P54823 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx6P54823 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Ddx6P54823 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx6P54823 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Ddx6P54823 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx6P54823 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ddx6P54823 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Ddx6P54823 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ddx6P54823 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
Ddx6P54823 Gm16148-201ENSMUST00000119653 893 ntBASIC27.54■■■□□ 2
Ddx6P54823 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ddx6P54823 Mipep-204ENSMUST00000225043 1548 ntBASIC27.54■■■□□ 2
Ddx6P54823 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ddx6P54823 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Ddx6P54823 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Ddx6P54823 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.51■■□□□ 1.99
Ddx6P54823 Peli2-204ENSMUST00000226513 1320 ntBASIC27.5■■□□□ 1.99
Ddx6P54823 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Ddx6P54823 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ddx6P54823 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Ddx6P54823 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
Ddx6P54823 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx6P54823 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ddx6P54823 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ddx6P54823 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.41■■□□□ 1.98
Ddx6P54823 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.4■■□□□ 1.98
Ddx6P54823 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx6P54823 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.37■■□□□ 1.97
Ddx6P54823 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms