Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.5■■□□□ 1.35
Hmga2P52927 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hmga2P52927 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hmga2P52927 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Hmga2P52927 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hmga2P52927 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Hmga2P52927 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.38■■□□□ 1.33
Hmga2P52927 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hmga2P52927 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmga2P52927 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.33■■□□□ 1.32
Hmga2P52927 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hmga2P52927 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hmga2P52927 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hmga2P52927 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hmga2P52927 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hmga2P52927 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.25■■□□□ 1.31
Hmga2P52927 Gm27325-201ENSMUST00000175467 74 ntBASIC23.23■■□□□ 1.31
Hmga2P52927 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.21■■□□□ 1.31
Hmga2P52927 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Hmga2P52927 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hmga2P52927 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hmga2P52927 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Hmga2P52927 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hmga2P52927 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.02■■□□□ 1.28
Hmga2P52927 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hmga2P52927 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmga2P52927 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmga2P52927 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmga2P52927 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.97■■□□□ 1.27
Hmga2P52927 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Hmga2P52927 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.93■■□□□ 1.26
Hmga2P52927 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hmga2P52927 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hmga2P52927 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hmga2P52927 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.89■■□□□ 1.25
Hmga2P52927 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Hmga2P52927 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Hmga2P52927 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Hmga2P52927 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Hmga2P52927 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hmga2P52927 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hmga2P52927 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.83■■□□□ 1.25
Hmga2P52927 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Hmga2P52927 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Hmga2P52927 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.79■■□□□ 1.24
Hmga2P52927 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hmga2P52927 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmga2P52927 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hmga2P52927 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Hmga2P52927 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hmga2P52927 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hmga2P52927 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.72■■□□□ 1.23
Hmga2P52927 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Hmga2P52927 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hmga2P52927 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Hmga2P52927 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.7■■□□□ 1.22
Hmga2P52927 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Hmga2P52927 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hmga2P52927 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hmga2P52927 Gm25238-201ENSMUST00000174914 89 ntBASIC22.66■■□□□ 1.22
Hmga2P52927 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.65■■□□□ 1.22
Hmga2P52927 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hmga2P52927 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hmga2P52927 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hmga2P52927 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Hmga2P52927 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.59■■□□□ 1.21
Hmga2P52927 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hmga2P52927 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.57■■□□□ 1.2
Hmga2P52927 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hmga2P52927 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.51■■□□□ 1.19
Hmga2P52927 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Hmga2P52927 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hmga2P52927 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hmga2P52927 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hmga2P52927 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hmga2P52927 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmga2P52927 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmga2P52927 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hmga2P52927 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Hmga2P52927 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hmga2P52927 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hmga2P52927 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.43■■□□□ 1.18
Hmga2P52927 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hmga2P52927 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Hmga2P52927 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hmga2P52927 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Hmga2P52927 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmga2P52927 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.34■■□□□ 1.17
Hmga2P52927 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Hmga2P52927 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmga2P52927 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.31■■□□□ 1.16
Hmga2P52927 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Hmga2P52927 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Hmga2P52927 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmga2P52927 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmga2P52927 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmga2P52927 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmga2P52927 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmga2P52927 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.28■■□□□ 1.16
Hmga2P52927 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms