Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hnf4aP49698 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hnf4aP49698 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Hnf4aP49698 Rab21-202ENSMUST00000218831 843 ntBASIC26.59■■□□□ 1.85
Hnf4aP49698 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.58■■□□□ 1.85
Hnf4aP49698 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hnf4aP49698 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hnf4aP49698 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Hnf4aP49698 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Hnf4aP49698 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Hnf4aP49698 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Hnf4aP49698 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.43■■□□□ 1.82
Hnf4aP49698 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hnf4aP49698 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Hnf4aP49698 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hnf4aP49698 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Hnf4aP49698 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Hnf4aP49698 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Hnf4aP49698 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hnf4aP49698 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.24■■□□□ 1.79
Hnf4aP49698 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.24■■□□□ 1.79
Hnf4aP49698 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.22■■□□□ 1.79
Hnf4aP49698 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hnf4aP49698 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hnf4aP49698 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hnf4aP49698 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Hnf4aP49698 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.15■■□□□ 1.78
Hnf4aP49698 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Hnf4aP49698 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Hnf4aP49698 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Hnf4aP49698 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
Hnf4aP49698 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.11■■□□□ 1.77
Hnf4aP49698 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Hnf4aP49698 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Hnf4aP49698 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hnf4aP49698 Gm25262-201ENSMUST00000174934 133 ntBASIC26.06■■□□□ 1.76
Hnf4aP49698 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Hnf4aP49698 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Hnf4aP49698 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hnf4aP49698 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Hnf4aP49698 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Hnf4aP49698 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
Hnf4aP49698 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Hnf4aP49698 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Hnf4aP49698 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Hnf4aP49698 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hnf4aP49698 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.91■■□□□ 1.74
Hnf4aP49698 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hnf4aP49698 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Hnf4aP49698 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Hnf4aP49698 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Hnf4aP49698 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Hnf4aP49698 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Hnf4aP49698 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Hnf4aP49698 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Hnf4aP49698 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Hnf4aP49698 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Hnf4aP49698 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Hnf4aP49698 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Hnf4aP49698 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.7■■□□□ 1.7
Hnf4aP49698 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Hnf4aP49698 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Hnf4aP49698 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.63■■□□□ 1.69
Hnf4aP49698 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.63■■□□□ 1.69
Hnf4aP49698 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hnf4aP49698 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.6■■□□□ 1.69
Hnf4aP49698 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hnf4aP49698 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hnf4aP49698 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Hnf4aP49698 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hnf4aP49698 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Hnf4aP49698 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Hnf4aP49698 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Hnf4aP49698 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hnf4aP49698 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hnf4aP49698 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hnf4aP49698 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hnf4aP49698 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hnf4aP49698 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hnf4aP49698 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Hnf4aP49698 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.45■■□□□ 1.66
Hnf4aP49698 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hnf4aP49698 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hnf4aP49698 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hnf4aP49698 Mipep-204ENSMUST00000225043 1548 ntBASIC25.42■■□□□ 1.66
Hnf4aP49698 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.42■■□□□ 1.66
Hnf4aP49698 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.41■■□□□ 1.66
Hnf4aP49698 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.4■■□□□ 1.66
Hnf4aP49698 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.37■■□□□ 1.65
Hnf4aP49698 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Hnf4aP49698 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Hnf4aP49698 Gm27322-201ENSMUST00000184007 104 ntBASIC25.35■■□□□ 1.65
Hnf4aP49698 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Hnf4aP49698 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
Hnf4aP49698 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hnf4aP49698 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hnf4aP49698 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.27■■□□□ 1.64
Hnf4aP49698 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hnf4aP49698 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.26■■□□□ 1.63
Hnf4aP49698 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms