Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,57■■□□□ 1,84
Rph3aP47708 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Rph3aP47708 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Rph3aP47708 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Rph3aP47708 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,49■■□□□ 1,83
Rph3aP47708 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,49■■□□□ 1,83
Rph3aP47708 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26,47■■□□□ 1,83
Rph3aP47708 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,47■■□□□ 1,83
Rph3aP47708 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Rph3aP47708 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,45■■□□□ 1,82
Rph3aP47708 Gm25262-201ENSMUST00000174934 133 ntBASIC26,43■■□□□ 1,82
Rph3aP47708 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,33■■□□□ 1,81
Rph3aP47708 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,31■■□□□ 1,8
Rph3aP47708 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Rph3aP47708 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Rph3aP47708 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,28■■□□□ 1,8
Rph3aP47708 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,26■■□□□ 1,79
Rph3aP47708 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,26■■□□□ 1,79
Rph3aP47708 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Rph3aP47708 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Rph3aP47708 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Rph3aP47708 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Rph3aP47708 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26,2■■□□□ 1,78
Rph3aP47708 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Rph3aP47708 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Rph3aP47708 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26,11■■□□□ 1,77
Rph3aP47708 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Rph3aP47708 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Rph3aP47708 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Rph3aP47708 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Rph3aP47708 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Rph3aP47708 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26,01■■□□□ 1,75
Rph3aP47708 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1,75
Rph3aP47708 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25,98■■□□□ 1,75
Rph3aP47708 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25,97■■□□□ 1,75
Rph3aP47708 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Rph3aP47708 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25,96■■□□□ 1,75
Rph3aP47708 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Rph3aP47708 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,92■■□□□ 1,74
Rph3aP47708 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Rph3aP47708 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,87■■□□□ 1,73
Rph3aP47708 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25,87■■□□□ 1,73
Rph3aP47708 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,87■■□□□ 1,73
Rph3aP47708 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Rph3aP47708 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,81■■□□□ 1,72
Rph3aP47708 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,79■■□□□ 1,72
Rph3aP47708 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,76■■□□□ 1,71
Rph3aP47708 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,74■■□□□ 1,71
Rph3aP47708 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25,73■■□□□ 1,71
Rph3aP47708 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Rph3aP47708 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,71■■□□□ 1,71
Rph3aP47708 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Rph3aP47708 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Rph3aP47708 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Rph3aP47708 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Rph3aP47708 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25,68■■□□□ 1,7
Rph3aP47708 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Rph3aP47708 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Rph3aP47708 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,64■■□□□ 1,69
Rph3aP47708 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,64■■□□□ 1,69
Rph3aP47708 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,63■■□□□ 1,69
Rph3aP47708 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,61■■□□□ 1,69
Rph3aP47708 Gm26115-201ENSMUST00000175605 87 ntBASIC25,59■■□□□ 1,69
Rph3aP47708 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Rph3aP47708 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Rph3aP47708 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,54■■□□□ 1,68
Rph3aP47708 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Rph3aP47708 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,53■■□□□ 1,68
Rph3aP47708 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Rph3aP47708 Gm27322-201ENSMUST00000184007 104 ntBASIC25,53■■□□□ 1,68
Rph3aP47708 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Rph3aP47708 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,52■■□□□ 1,68
Rph3aP47708 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,52■■□□□ 1,68
Rph3aP47708 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25,51■■□□□ 1,67
Rph3aP47708 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25,5■■□□□ 1,67
Rph3aP47708 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Rph3aP47708 Gm8109-201ENSMUST00000194076 746 ntBASIC25,48■■□□□ 1,67
Rph3aP47708 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25,48■■□□□ 1,67
Rph3aP47708 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Rph3aP47708 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25,46■■□□□ 1,67
Rph3aP47708 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25,46■■□□□ 1,67
Rph3aP47708 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,45■■□□□ 1,66
Rph3aP47708 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25,37■■□□□ 1,65
Rph3aP47708 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,33■■□□□ 1,65
Rph3aP47708 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,33■■□□□ 1,65
Rph3aP47708 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,31■■□□□ 1,64
Rph3aP47708 Mipep-204ENSMUST00000225043 1548 ntBASIC25,3■■□□□ 1,64
Rph3aP47708 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Rph3aP47708 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,28■■□□□ 1,64
Rph3aP47708 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Rph3aP47708 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25,26■■□□□ 1,63
Rph3aP47708 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25,24■■□□□ 1,63
Rph3aP47708 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rph3aP47708 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rph3aP47708 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Rph3aP47708 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25,19■■□□□ 1,62
Rph3aP47708 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rph3aP47708 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25,12■■□□□ 1,61
Rph3aP47708 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25,12■■□□□ 1,61
Rph3aP47708 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 19,9 ms