Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Gm23366-201ENSMUST00000175022 89 ntBASIC22.94■■□□□ 1.26
Foxa3P35584 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Foxa3P35584 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Foxa3P35584 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Foxa3P35584 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Foxa3P35584 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.88■■□□□ 1.25
Foxa3P35584 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.78■■□□□ 1.24
Foxa3P35584 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Foxa3P35584 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Foxa3P35584 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Foxa3P35584 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Foxa3P35584 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Foxa3P35584 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Foxa3P35584 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Foxa3P35584 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Foxa3P35584 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Foxa3P35584 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Foxa3P35584 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Foxa3P35584 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Foxa3P35584 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Foxa3P35584 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Foxa3P35584 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.57■■□□□ 1.2
Foxa3P35584 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Foxa3P35584 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.55■■□□□ 1.2
Foxa3P35584 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Foxa3P35584 Zxda-201ENSMUST00000117281 2621 ntBASIC22.5■■□□□ 1.19
Foxa3P35584 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Foxa3P35584 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.47■■□□□ 1.19
Foxa3P35584 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Foxa3P35584 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Foxa3P35584 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Foxa3P35584 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Foxa3P35584 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Foxa3P35584 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Foxa3P35584 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.4■■□□□ 1.18
Foxa3P35584 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.4■■□□□ 1.18
Foxa3P35584 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Foxa3P35584 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Foxa3P35584 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxa3P35584 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Foxa3P35584 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.3■■□□□ 1.16
Foxa3P35584 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Foxa3P35584 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxa3P35584 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxa3P35584 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Foxa3P35584 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Foxa3P35584 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Foxa3P35584 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxa3P35584 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxa3P35584 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxa3P35584 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.22■■□□□ 1.15
Foxa3P35584 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxa3P35584 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxa3P35584 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.16■■□□□ 1.14
Foxa3P35584 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxa3P35584 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxa3P35584 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxa3P35584 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Foxa3P35584 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxa3P35584 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.1■■□□□ 1.13
Foxa3P35584 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxa3P35584 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxa3P35584 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxa3P35584 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxa3P35584 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxa3P35584 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Foxa3P35584 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Foxa3P35584 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Foxa3P35584 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.03■■□□□ 1.12
Foxa3P35584 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxa3P35584 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxa3P35584 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Foxa3P35584 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxa3P35584 Gm27325-201ENSMUST00000175467 74 ntBASIC21.99■■□□□ 1.11
Foxa3P35584 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxa3P35584 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxa3P35584 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Foxa3P35584 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Foxa3P35584 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxa3P35584 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Foxa3P35584 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Foxa3P35584 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Foxa3P35584 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Foxa3P35584 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Foxa3P35584 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Foxa3P35584 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxa3P35584 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxa3P35584 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Foxa3P35584 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Foxa3P35584 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxa3P35584 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxa3P35584 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.9■■□□□ 1.1
Foxa3P35584 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Foxa3P35584 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Foxa3P35584 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Foxa3P35584 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
Foxa3P35584 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Foxa3P35584 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Foxa3P35584 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
Foxa3P35584 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms