Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.92□□□□□ -0.181e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)7.47□□□□□ -1.211e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.19□□□□□ -1.421e-24■■■■■ 54
CSTF2P33240 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.41■□□□□ 0.067e-9■■■■■ 53.6
CSTF2P33240 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.61□□□□□ -0.237e-9■■■■■ 53.6
CSTF2P33240 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.989e-8■■■■■ 53.1
CSTF2P33240 CHPT1-203ENST00000546873 624 ntTSL 36.45□□□□□ -1.386e-7■■■■■ 53.1
CSTF2P33240 EHBP1-205ENST00000413434 533 ntTSL 49.18□□□□□ -0.941e-7■■■■■ 52.3
CSTF2P33240 EHBP1-207ENST00000426940 586 ntTSL 47.84□□□□□ -1.151e-7■■■■■ 52.3
CSTF2P33240 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.04□□□□□ -1.61e-7■■■■■ 52.3
CSTF2P33240 APLP2-223ENST00000534001 585 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-218ENST00000533532 584 ntTSL 220.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-213ENST00000529701 573 ntTSL 520.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-214ENST00000530132 542 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-217ENST00000533195 560 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-224ENST00000534582 556 ntTSL 520.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-208ENST00000526330 582 ntTSL 320.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-220ENST00000533618 574 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-221ENST00000533713 560 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-209ENST00000527702 579 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.55■□□□□ 0.723e-15■■■■■ 49.6
CSTF2P33240 APLP2-216ENST00000532456 664 ntTSL 419.3■□□□□ 0.683e-15■■■■■ 49.6
CSTF2P33240 APLP2-219ENST00000533616 2041 ntTSL 217.7■□□□□ 0.423e-15■■■■■ 49.6
CSTF2P33240 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.43■□□□□ 0.383e-15■■■■■ 49.6
CSTF2P33240 APLP2-225ENST00000534761 551 ntTSL 516.6■□□□□ 0.253e-15■■■■■ 49.6
CSTF2P33240 APLP2-211ENST00000529235 537 ntTSL 414.48□□□□□ -0.093e-15■■■■■ 49.6
CSTF2P33240 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.233e-15■■■■■ 49.6
CSTF2P33240 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.373e-15■■■■■ 49.6
CSTF2P33240 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.423e-15■■■■■ 49.6
CSTF2P33240 APLP2-206ENST00000525215 478 ntTSL 24.03□□□□□ -1.763e-15■■■■■ 49.6
CSTF2P33240 APLP2-205ENST00000461918 553 ntTSL 33.26□□□□□ -1.893e-15■■■■■ 49.6
CSTF2P33240 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.55□□□□□ -0.242e-10■■■■■ 49.2
CSTF2P33240 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.55□□□□□ -0.242e-10■■■■■ 49.2
CSTF2P33240 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC11.86□□□□□ -0.512e-10■■■■■ 49.2
CSTF2P33240 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC10.75□□□□□ -0.692e-10■■■■■ 49.2
CSTF2P33240 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.21□□□□□ -1.12e-10■■■■■ 49.2
CSTF2P33240 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.132e-10■■■■■ 49.2
CSTF2P33240 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.84e-7■■■■■ 49
CSTF2P33240 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.674e-7■■■■■ 49
CSTF2P33240 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.644e-7■■■■■ 49
CSTF2P33240 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)11.91□□□□□ -0.54e-7■■■■■ 49
CSTF2P33240 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.884e-7■■■■■ 49
CSTF2P33240 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)8.81□□□□□ -14e-7■■■■■ 49
CSTF2P33240 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.154e-7■■■■■ 47.4
CSTF2P33240 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.341e-17■■■■■ 47.2
CSTF2P33240 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.85■□□□□ 0.771e-17■■■■■ 47.2
CSTF2P33240 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.62■□□□□ 0.731e-17■■■■■ 47.2
CSTF2P33240 RNASET2-204ENST00000421787 1924 ntTSL 219.02■□□□□ 0.631e-17■■■■■ 47.2
CSTF2P33240 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.25■□□□□ 0.511e-17■■■■■ 47.2
CSTF2P33240 RNASET2-201ENST00000028008 1220 ntTSL 517.77■□□□□ 0.441e-17■■■■■ 47.2
CSTF2P33240 RNASET2-207ENST00000478180 963 ntTSL 517.52■□□□□ 0.41e-17■■■■■ 47.2
CSTF2P33240 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.21e-17■■■■■ 47.2
CSTF2P33240 RNASET2-202ENST00000358165 2445 ntTSL 215.33■□□□□ 0.041e-17■■■■■ 47.2
CSTF2P33240 RNASET2-209ENST00000499370 2164 ntTSL 210.49□□□□□ -0.731e-17■■■■■ 47.2
CSTF2P33240 RNASET2-208ENST00000496851 881 ntTSL 59.44□□□□□ -0.91e-17■■■■■ 47.2
CSTF2P33240 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.551e-17■■■■■ 47.2
CSTF2P33240 PPARG-208ENST00000397023 2002 ntTSL 59.31□□□□□ -0.922e-17■■■■■ 47
CSTF2P33240 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.092e-17■■■■■ 47
CSTF2P33240 PPARG-213ENST00000477039 1705 ntTSL 1 (best)7.81□□□□□ -1.162e-17■■■■■ 47
CSTF2P33240 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.56□□□□□ -1.364e-16■■■■■ 46.8
CSTF2P33240 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.211e-10■■■■■ 46.7
CSTF2P33240 IP6K2-227ENST00000479914 1077 ntTSL 1 (best)16.69■□□□□ 0.263e-7■■■■■ 46.5
CSTF2P33240 IP6K2-220ENST00000449563 580 ntTSL 412.98□□□□□ -0.333e-7■■■■■ 46.5
CSTF2P33240 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-7■■■■■ 46.5
CSTF2P33240 IP6K2-206ENST00000413654 553 ntTSL 412.19□□□□□ -0.463e-7■■■■■ 46.5
CSTF2P33240 IP6K2-224ENST00000454335 631 ntTSL 411.64□□□□□ -0.553e-7■■■■■ 46.5
CSTF2P33240 IP6K2-204ENST00000412850 543 ntTSL 410.35□□□□□ -0.753e-7■■■■■ 46.5
CSTF2P33240 IP6K2-215ENST00000437427 576 ntTSL 49.15□□□□□ -0.943e-7■■■■■ 46.5
CSTF2P33240 IP6K2-217ENST00000443853 579 ntTSL 39.15□□□□□ -0.943e-7■■■■■ 46.5
CSTF2P33240 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.253e-11■■■■■ 46.4
CSTF2P33240 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.193e-11■■■■■ 46.4
CSTF2P33240 RABL6-210ENST00000484471 2746 ntTSL 518.96■□□□□ 0.633e-11■■■■■ 46.4
CSTF2P33240 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.333e-11■■■■■ 46.4
CSTF2P33240 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.213e-11■■■■■ 46.4
CSTF2P33240 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC12.35□□□□□ -0.433e-11■■■■■ 46.4
CSTF2P33240 MGST2-203ENST00000503816 1780 ntTSL 515.56■□□□□ 0.082e-7■■■■■ 46
CSTF2P33240 MGST2-206ENST00000515137 1013 ntTSL 1 (best)8.76□□□□□ -1.012e-7■■■■■ 46
CSTF2P33240 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC8.48□□□□□ -1.052e-7■■■■■ 46
CSTF2P33240 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.25■□□□□ 0.514e-7■■■■■ 46
CSTF2P33240 RBMS1-211ENST00000477486 562 ntTSL 421.82■■□□□ 1.087e-11■■■■■ 45.9
CSTF2P33240 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)16.4■□□□□ 0.227e-11■■■■■ 45.9
CSTF2P33240 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.47e-11■■■■■ 45.9
CSTF2P33240 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)4.62□□□□□ -1.677e-11■■■■■ 45.9
CSTF2P33240 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.43■□□□□ 0.863e-12■■■■■ 45.9
CSTF2P33240 FARP2-216ENST00000478489 617 ntTSL 319.83■□□□□ 0.773e-12■■■■■ 45.9
CSTF2P33240 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.03■□□□□ 0.323e-12■■■■■ 45.9
CSTF2P33240 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.263e-12■■■■■ 45.9
CSTF2P33240 FARP2-209ENST00000464142 442 ntTSL 311.35□□□□□ -0.593e-12■■■■■ 45.9
CSTF2P33240 FARP2-205ENST00000418082 456 ntTSL 410.14□□□□□ -0.793e-12■■■■■ 45.9
CSTF2P33240 FARP2-208ENST00000445489 538 ntTSL 210.02□□□□□ -0.813e-12■■■■■ 45.9
CSTF2P33240 FARP2-210ENST00000467260 471 ntTSL 37.39□□□□□ -1.233e-12■■■■■ 45.9
CSTF2P33240 FARP2-213ENST00000473082 397 ntTSL 34.89□□□□□ -1.633e-12■■■■■ 45.9
CSTF2P33240 NFIA-214ENST00000496712 603 ntTSL 34.04□□□□□ -1.764e-33■■■■■ 45.6
CSTF2P33240 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)9.41□□□□□ -0.98e-46■■■■■ 44.8
CSTF2P33240 ITGB5-202ENST00000460797 2228 ntTSL 211.82□□□□□ -0.521e-16■■■■■ 44.8
CSTF2P33240 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.31□□□□□ -1.882e-16■■■■■ 44.6
CSTF2P33240 PICALM-215ENST00000531558 565 ntTSL 525.13■■□□□ 1.616e-7■■■■■ 44.5
CSTF2P33240 PICALM-218ENST00000532041 699 ntTSL 322.89■■□□□ 1.256e-7■■■■■ 44.5
CSTF2P33240 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.66■■□□□ 1.226e-7■■■■■ 44.5
CSTF2P33240 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.166e-7■■■■■ 44.5
Retrieved 100 of 6,735 protein–RNA pairs in 88.8 ms