Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27,92■■■□□ 2,06
RxrbP28704 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27,91■■■□□ 2,06
RxrbP28704 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27,85■■■□□ 2,05
RxrbP28704 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
RxrbP28704 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
RxrbP28704 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,81■■■□□ 2,04
RxrbP28704 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
RxrbP28704 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27,63■■■□□ 2,01
RxrbP28704 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27,56■■■□□ 2
RxrbP28704 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
RxrbP28704 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
RxrbP28704 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27,5■■□□□ 1,99
RxrbP28704 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
RxrbP28704 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27,44■■□□□ 1,98
RxrbP28704 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27,42■■□□□ 1,98
RxrbP28704 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
RxrbP28704 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27,38■■□□□ 1,97
RxrbP28704 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27,37■■□□□ 1,97
RxrbP28704 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27,36■■□□□ 1,97
RxrbP28704 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27,35■■□□□ 1,97
RxrbP28704 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,35■■□□□ 1,97
RxrbP28704 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,97
RxrbP28704 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
RxrbP28704 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27,3■■□□□ 1,96
RxrbP28704 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27,29■■□□□ 1,96
RxrbP28704 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,29■■□□□ 1,96
RxrbP28704 Gm2415-204ENSMUST00000190235 2004 ntBASIC27,28■■□□□ 1,96
RxrbP28704 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27,27■■□□□ 1,96
RxrbP28704 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27,26■■□□□ 1,96
RxrbP28704 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27,25■■□□□ 1,95
RxrbP28704 Gm27325-201ENSMUST00000175467 74 ntBASIC27,24■■□□□ 1,95
RxrbP28704 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
RxrbP28704 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,17■■□□□ 1,94
RxrbP28704 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,14■■□□□ 1,94
RxrbP28704 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27,1■■□□□ 1,93
RxrbP28704 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27,07■■□□□ 1,92
RxrbP28704 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,06■■□□□ 1,92
RxrbP28704 Gm25238-201ENSMUST00000174914 89 ntBASIC27,06■■□□□ 1,92
RxrbP28704 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27,05■■□□□ 1,92
RxrbP28704 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
RxrbP28704 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
RxrbP28704 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
RxrbP28704 Gm6658-202ENSMUST00000209493 1885 ntBASIC27,02■■□□□ 1,92
RxrbP28704 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,91
RxrbP28704 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,91
RxrbP28704 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1,91
RxrbP28704 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
RxrbP28704 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
RxrbP28704 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,99■■□□□ 1,91
RxrbP28704 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26,95■■□□□ 1,91
RxrbP28704 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,93■■□□□ 1,9
RxrbP28704 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26,93■■□□□ 1,9
RxrbP28704 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26,93■■□□□ 1,9
RxrbP28704 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
RxrbP28704 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26,92■■□□□ 1,9
RxrbP28704 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26,9■■□□□ 1,9
RxrbP28704 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
RxrbP28704 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,83■■□□□ 1,89
RxrbP28704 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
RxrbP28704 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
RxrbP28704 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26,82■■□□□ 1,88
RxrbP28704 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26,82■■□□□ 1,88
RxrbP28704 Gm9905-201ENSMUST00000065740 1845 ntBASIC26,81■■□□□ 1,88
RxrbP28704 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26,78■■□□□ 1,88
RxrbP28704 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26,78■■□□□ 1,88
RxrbP28704 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26,76■■□□□ 1,88
RxrbP28704 Gm6206-201ENSMUST00000133472 2199 ntBASIC26,75■■□□□ 1,87
RxrbP28704 Zxda-201ENSMUST00000117281 2621 ntBASIC26,74■■□□□ 1,87
RxrbP28704 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26,74■■□□□ 1,87
RxrbP28704 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26,74■■□□□ 1,87
RxrbP28704 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
RxrbP28704 Zfp131-207ENSMUST00000224946 1783 ntBASIC26,73■■□□□ 1,87
RxrbP28704 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26,72■■□□□ 1,87
RxrbP28704 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
RxrbP28704 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26,72■■□□□ 1,87
RxrbP28704 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,72■■□□□ 1,87
RxrbP28704 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26,71■■□□□ 1,87
RxrbP28704 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26,7■■□□□ 1,87
RxrbP28704 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26,7■■□□□ 1,86
RxrbP28704 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26,69■■□□□ 1,86
RxrbP28704 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
RxrbP28704 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26,64■■□□□ 1,86
RxrbP28704 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26,64■■□□□ 1,86
RxrbP28704 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26,63■■□□□ 1,85
RxrbP28704 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
RxrbP28704 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
RxrbP28704 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
RxrbP28704 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
RxrbP28704 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26,57■■□□□ 1,84
RxrbP28704 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26,56■■□□□ 1,84
RxrbP28704 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,55■■□□□ 1,84
RxrbP28704 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
RxrbP28704 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26,54■■□□□ 1,84
RxrbP28704 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
RxrbP28704 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
RxrbP28704 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26,52■■□□□ 1,84
RxrbP28704 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,51■■□□□ 1,83
RxrbP28704 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
RxrbP28704 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
RxrbP28704 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26,46■■□□□ 1,83
Retrieved 100 of 76,532 protein–RNA pairs in 24,7 ms