Protein–RNA interactions for Protein: P22339

Gadd45b, Growth arrest and DNA damage-inducible protein GADD45 beta, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gadd45bP22339 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Gadd45bP22339 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Gadd45bP22339 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Gadd45bP22339 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Gadd45bP22339 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.7■■■□□ 2.67
Gadd45bP22339 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Gadd45bP22339 Gm27325-201ENSMUST00000175467 74 ntBASIC31.61■■■□□ 2.65
Gadd45bP22339 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.59■■■□□ 2.65
Gadd45bP22339 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Gadd45bP22339 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gadd45bP22339 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Gadd45bP22339 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.47■■■□□ 2.63
Gadd45bP22339 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Gadd45bP22339 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Gadd45bP22339 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.38■■■□□ 2.61
Gadd45bP22339 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Gadd45bP22339 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.35■■■□□ 2.61
Gadd45bP22339 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Gadd45bP22339 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Gadd45bP22339 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Gadd45bP22339 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Gadd45bP22339 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Gadd45bP22339 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Gadd45bP22339 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Gadd45bP22339 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Gadd45bP22339 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Gadd45bP22339 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Gadd45bP22339 Gm25238-201ENSMUST00000174914 89 ntBASIC31.16■■■□□ 2.58
Gadd45bP22339 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.15■■■□□ 2.58
Gadd45bP22339 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Gadd45bP22339 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.57
Gadd45bP22339 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.03■■■□□ 2.56
Gadd45bP22339 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.02■■■□□ 2.56
Gadd45bP22339 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Gadd45bP22339 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.98■■■□□ 2.55
Gadd45bP22339 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.96■■■□□ 2.55
Gadd45bP22339 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Gadd45bP22339 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Gadd45bP22339 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Gadd45bP22339 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Gadd45bP22339 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Gadd45bP22339 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Gadd45bP22339 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Gadd45bP22339 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.88■■■□□ 2.53
Gadd45bP22339 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
Gadd45bP22339 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Gadd45bP22339 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.83■■■□□ 2.53
Gadd45bP22339 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Gadd45bP22339 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Gadd45bP22339 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Gadd45bP22339 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
Gadd45bP22339 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.77■■■□□ 2.52
Gadd45bP22339 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Gadd45bP22339 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Gadd45bP22339 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.74■■■□□ 2.51
Gadd45bP22339 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Gadd45bP22339 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Gadd45bP22339 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Gadd45bP22339 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Gadd45bP22339 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gadd45bP22339 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gadd45bP22339 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
Gadd45bP22339 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Gadd45bP22339 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Gadd45bP22339 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Gadd45bP22339 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.53■■■□□ 2.48
Gadd45bP22339 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
Gadd45bP22339 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gadd45bP22339 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.5■■■□□ 2.47
Gadd45bP22339 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.49■■■□□ 2.47
Gadd45bP22339 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gadd45bP22339 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Gadd45bP22339 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Gadd45bP22339 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
Gadd45bP22339 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.44■■■□□ 2.46
Gadd45bP22339 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Gadd45bP22339 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.43■■■□□ 2.46
Gadd45bP22339 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gadd45bP22339 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gadd45bP22339 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Gadd45bP22339 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Gadd45bP22339 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.36■■■□□ 2.45
Gadd45bP22339 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Gadd45bP22339 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Gadd45bP22339 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
Gadd45bP22339 Rab21-202ENSMUST00000218831 843 ntBASIC30.28■■■□□ 2.44
Gadd45bP22339 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gadd45bP22339 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Gadd45bP22339 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Gadd45bP22339 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Gadd45bP22339 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Gadd45bP22339 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gadd45bP22339 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.24■■■□□ 2.43
Gadd45bP22339 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Gadd45bP22339 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Gadd45bP22339 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.18■■■□□ 2.42
Gadd45bP22339 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Gadd45bP22339 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.17■■■□□ 2.42
Gadd45bP22339 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Gadd45bP22339 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms