Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnfrsf9P20334 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.06■■□□□ 1.12
Tnfrsf9P20334 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tnfrsf9P20334 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Tnfrsf9P20334 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.04■■□□□ 1.12
Tnfrsf9P20334 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.03■■□□□ 1.12
Tnfrsf9P20334 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.03■■□□□ 1.12
Tnfrsf9P20334 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnfrsf9P20334 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tnfrsf9P20334 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.97■■□□□ 1.11
Tnfrsf9P20334 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf9P20334 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf9P20334 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf9P20334 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Tnfrsf9P20334 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf9P20334 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf9P20334 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.85■■□□□ 1.09
Tnfrsf9P20334 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf9P20334 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnfrsf9P20334 Zfp131-205ENSMUST00000223812 663 ntBASIC21.81■■□□□ 1.08
Tnfrsf9P20334 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf9P20334 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf9P20334 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Tnfrsf9P20334 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfrsf9P20334 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfrsf9P20334 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.76■■□□□ 1.07
Tnfrsf9P20334 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf9P20334 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf9P20334 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf9P20334 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.69■■□□□ 1.06
Tnfrsf9P20334 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf9P20334 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf9P20334 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf9P20334 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf9P20334 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.64■■□□□ 1.05
Tnfrsf9P20334 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.63■■□□□ 1.05
Tnfrsf9P20334 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.63■■□□□ 1.05
Tnfrsf9P20334 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf9P20334 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf9P20334 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf9P20334 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf9P20334 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf9P20334 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf9P20334 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf9P20334 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf9P20334 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tnfrsf9P20334 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.54■■□□□ 1.04
Tnfrsf9P20334 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf9P20334 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf9P20334 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Tnfrsf9P20334 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf9P20334 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf9P20334 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf9P20334 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.39■■□□□ 1.01
Tnfrsf9P20334 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf9P20334 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.37■■□□□ 1.01
Tnfrsf9P20334 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf9P20334 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf9P20334 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.35■■□□□ 1.01
Tnfrsf9P20334 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf9P20334 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf9P20334 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf9P20334 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf9P20334 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf9P20334 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf9P20334 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf9P20334 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf9P20334 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tnfrsf9P20334 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tnfrsf9P20334 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf9P20334 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tnfrsf9P20334 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf9P20334 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tnfrsf9P20334 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tnfrsf9P20334 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.23■□□□□ 0.99
Tnfrsf9P20334 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf9P20334 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf9P20334 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf9P20334 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf9P20334 Gm16148-201ENSMUST00000119653 893 ntBASIC21.17■□□□□ 0.98
Tnfrsf9P20334 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf9P20334 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Tnfrsf9P20334 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.14■□□□□ 0.97
Tnfrsf9P20334 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf9P20334 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf9P20334 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.12■□□□□ 0.97
Tnfrsf9P20334 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf9P20334 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf9P20334 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf9P20334 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf9P20334 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf9P20334 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tnfrsf9P20334 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tnfrsf9P20334 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.06■□□□□ 0.96
Tnfrsf9P20334 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Tnfrsf9P20334 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf9P20334 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf9P20334 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf9P20334 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tnfrsf9P20334 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms