Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
P04940 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
P04940 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
P04940 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.68■■□□□ 1.22
P04940 Rab21-202ENSMUST00000218831 843 ntBASIC22.68■■□□□ 1.22
P04940 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
P04940 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
P04940 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
P04940 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
P04940 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
P04940 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.53■■□□□ 1.2
P04940 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
P04940 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
P04940 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
P04940 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
P04940 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
P04940 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
P04940 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
P04940 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
P04940 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.38■■□□□ 1.17
P04940 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.37■■□□□ 1.17
P04940 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
P04940 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.34■■□□□ 1.17
P04940 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
P04940 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.33■■□□□ 1.17
P04940 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
P04940 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
P04940 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
P04940 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
P04940 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
P04940 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
P04940 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.27■■□□□ 1.16
P04940 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
P04940 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
P04940 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
P04940 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
P04940 Gm25262-201ENSMUST00000174934 133 ntBASIC22.21■■□□□ 1.15
P04940 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
P04940 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
P04940 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
P04940 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
P04940 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
P04940 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
P04940 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
P04940 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
P04940 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.09■■□□□ 1.13
P04940 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
P04940 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
P04940 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
P04940 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
P04940 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
P04940 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
P04940 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22■■□□□ 1.11
P04940 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04940 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
P04940 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
P04940 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
P04940 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.92■■□□□ 1.1
P04940 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
P04940 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
P04940 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.85■■□□□ 1.09
P04940 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.85■■□□□ 1.09
P04940 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.84■■□□□ 1.09
P04940 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
P04940 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
P04940 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P04940 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
P04940 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04940 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
P04940 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
P04940 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
P04940 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
P04940 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P04940 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
P04940 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P04940 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
P04940 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
P04940 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
P04940 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.69■■□□□ 1.06
P04940 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
P04940 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.68■■□□□ 1.06
P04940 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
P04940 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
P04940 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.67■■□□□ 1.06
P04940 Mipep-204ENSMUST00000225043 1548 ntBASIC21.66■■□□□ 1.06
P04940 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.64■■□□□ 1.06
P04940 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.64■■□□□ 1.05
P04940 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P04940 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
P04940 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
P04940 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
P04940 Gm27322-201ENSMUST00000184007 104 ntBASIC21.58■■□□□ 1.05
P04940 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.58■■□□□ 1.05
P04940 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P04940 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.55■■□□□ 1.04
P04940 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04940 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04940 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
P04940 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.52■■□□□ 1.04
P04940 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms