Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,71■■□□□ 1,23
P04940 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
P04940 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,69■■□□□ 1,22
P04940 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22,68■■□□□ 1,22
P04940 Rab21-202ENSMUST00000218831 843 ntBASIC22,68■■□□□ 1,22
P04940 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
P04940 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
P04940 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,6■■□□□ 1,21
P04940 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,58■■□□□ 1,2
P04940 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22,55■■□□□ 1,2
P04940 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22,53■■□□□ 1,2
P04940 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,53■■□□□ 1,2
P04940 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
P04940 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
P04940 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22,5■■□□□ 1,19
P04940 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,48■■□□□ 1,19
P04940 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22,46■■□□□ 1,19
P04940 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
P04940 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22,39■■□□□ 1,17
P04940 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,38■■□□□ 1,17
P04940 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22,37■■□□□ 1,17
P04940 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
P04940 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22,34■■□□□ 1,17
P04940 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,34■■□□□ 1,17
P04940 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22,33■■□□□ 1,17
P04940 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22,33■■□□□ 1,16
P04940 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,3■■□□□ 1,16
P04940 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22,29■■□□□ 1,16
P04940 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22,29■■□□□ 1,16
P04940 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
P04940 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22,27■■□□□ 1,16
P04940 Zfp131-207ENSMUST00000224946 1783 ntBASIC22,27■■□□□ 1,16
P04940 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22,25■■□□□ 1,15
P04940 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22,23■■□□□ 1,15
P04940 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
P04940 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22,21■■□□□ 1,15
P04940 Gm25262-201ENSMUST00000174934 133 ntBASIC22,21■■□□□ 1,15
P04940 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,15
P04940 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
P04940 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
P04940 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22,18■■□□□ 1,14
P04940 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,15■■□□□ 1,14
P04940 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,14■■□□□ 1,13
P04940 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22,12■■□□□ 1,13
P04940 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
P04940 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22,09■■□□□ 1,13
P04940 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,06■■□□□ 1,12
P04940 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
P04940 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
P04940 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,04■■□□□ 1,12
P04940 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
P04940 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22,01■■□□□ 1,11
P04940 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22■■□□□ 1,11
P04940 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,99■■□□□ 1,11
P04940 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
P04940 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21,95■■□□□ 1,1
P04940 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,94■■□□□ 1,1
P04940 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21,92■■□□□ 1,1
P04940 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21,92■■□□□ 1,1
P04940 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21,91■■□□□ 1,1
P04940 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21,85■■□□□ 1,09
P04940 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21,85■■□□□ 1,09
P04940 AL845457.1-201ENSMUST00000197244 68 ntBASIC21,84■■□□□ 1,09
P04940 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
P04940 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21,83■■□□□ 1,09
P04940 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21,81■■□□□ 1,08
P04940 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21,81■■□□□ 1,08
P04940 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21,8■■□□□ 1,08
P04940 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21,79■■□□□ 1,08
P04940 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21,78■■□□□ 1,08
P04940 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21,77■■□□□ 1,08
P04940 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
P04940 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
P04940 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21,74■■□□□ 1,07
P04940 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
P04940 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21,72■■□□□ 1,07
P04940 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21,71■■□□□ 1,07
P04940 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,71■■□□□ 1,07
P04940 Gm17082-201ENSMUST00000166043 1091 ntBASIC21,69■■□□□ 1,06
P04940 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21,69■■□□□ 1,06
P04940 Gm2415-204ENSMUST00000190235 2004 ntBASIC21,68■■□□□ 1,06
P04940 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21,68■■□□□ 1,06
P04940 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21,68■■□□□ 1,06
P04940 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21,67■■□□□ 1,06
P04940 Mipep-204ENSMUST00000225043 1548 ntBASIC21,66■■□□□ 1,06
P04940 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21,64■■□□□ 1,06
P04940 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,64■■□□□ 1,05
P04940 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
P04940 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21,61■■□□□ 1,05
P04940 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21,59■■□□□ 1,05
P04940 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21,59■■□□□ 1,05
P04940 Gm27322-201ENSMUST00000184007 104 ntBASIC21,58■■□□□ 1,05
P04940 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21,58■■□□□ 1,05
P04940 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
P04940 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21,55■■□□□ 1,04
P04940 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,53■■□□□ 1,04
P04940 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
P04940 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,53■■□□□ 1,04
P04940 Gm6658-202ENSMUST00000209493 1885 ntBASIC21,52■■□□□ 1,04
P04940 AC166822.3-201ENSMUST00000227394 661 ntBASIC21,51■■□□□ 1,03
Retrieved 100 of 76,532 protein–RNA pairs in 7,8 ms