Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PrnpP04925 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PrnpP04925 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
PrnpP04925 Gm27322-201ENSMUST00000184007 104 ntBASIC29.67■■■□□ 2.34
PrnpP04925 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.67■■■□□ 2.34
PrnpP04925 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PrnpP04925 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PrnpP04925 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PrnpP04925 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.62■■■□□ 2.33
PrnpP04925 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.61■■■□□ 2.33
PrnpP04925 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
PrnpP04925 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.54■■■□□ 2.32
PrnpP04925 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
PrnpP04925 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PrnpP04925 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PrnpP04925 Gm24804-201ENSMUST00000174982 85 ntBASIC29.45■■■□□ 2.31
PrnpP04925 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PrnpP04925 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.32■■■□□ 2.28
PrnpP04925 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PrnpP04925 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PrnpP04925 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.26■■■□□ 2.27
PrnpP04925 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PrnpP04925 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PrnpP04925 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PrnpP04925 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PrnpP04925 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
PrnpP04925 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.11■■■□□ 2.25
PrnpP04925 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
PrnpP04925 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PrnpP04925 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PrnpP04925 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.98■■■□□ 2.23
PrnpP04925 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.96■■■□□ 2.23
PrnpP04925 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PrnpP04925 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PrnpP04925 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PrnpP04925 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.95■■■□□ 2.22
PrnpP04925 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.92■■■□□ 2.22
PrnpP04925 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
PrnpP04925 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PrnpP04925 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
PrnpP04925 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
PrnpP04925 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PrnpP04925 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PrnpP04925 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PrnpP04925 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PrnpP04925 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PrnpP04925 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.82■■■□□ 2.2
PrnpP04925 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PrnpP04925 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
PrnpP04925 Zfp131-205ENSMUST00000223812 663 ntBASIC28.79■■■□□ 2.2
PrnpP04925 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PrnpP04925 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
PrnpP04925 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PrnpP04925 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PrnpP04925 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PrnpP04925 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PrnpP04925 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PrnpP04925 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PrnpP04925 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PrnpP04925 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.53■■■□□ 2.16
PrnpP04925 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PrnpP04925 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
PrnpP04925 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.51■■■□□ 2.15
PrnpP04925 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PrnpP04925 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PrnpP04925 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PrnpP04925 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PrnpP04925 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.46■■■□□ 2.15
PrnpP04925 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PrnpP04925 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PrnpP04925 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PrnpP04925 Gm16148-201ENSMUST00000119653 893 ntBASIC28.41■■■□□ 2.14
PrnpP04925 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PrnpP04925 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PrnpP04925 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PrnpP04925 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
PrnpP04925 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PrnpP04925 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PrnpP04925 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PrnpP04925 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PrnpP04925 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PrnpP04925 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PrnpP04925 Peli2-204ENSMUST00000226513 1320 ntBASIC28.26■■■□□ 2.11
PrnpP04925 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PrnpP04925 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
PrnpP04925 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PrnpP04925 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PrnpP04925 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.2■■■□□ 2.1
PrnpP04925 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.2■■■□□ 2.1
PrnpP04925 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.18■■■□□ 2.1
PrnpP04925 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PrnpP04925 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PrnpP04925 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
PrnpP04925 Mipep-204ENSMUST00000225043 1548 ntBASIC28.14■■■□□ 2.1
PrnpP04925 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.13■■■□□ 2.09
PrnpP04925 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PrnpP04925 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
PrnpP04925 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PrnpP04925 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PrnpP04925 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms