Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.28■□□□□ 0.68
Hbb-b1P02088 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hbb-b1P02088 Zxda-201ENSMUST00000117281 2621 ntBASIC19.22■□□□□ 0.67
Hbb-b1P02088 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hbb-b1P02088 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hbb-b1P02088 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hbb-b1P02088 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hbb-b1P02088 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hbb-b1P02088 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hbb-b1P02088 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hbb-b1P02088 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hbb-b1P02088 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hbb-b1P02088 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hbb-b1P02088 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hbb-b1P02088 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hbb-b1P02088 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hbb-b1P02088 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hbb-b1P02088 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hbb-b1P02088 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hbb-b1P02088 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hbb-b1P02088 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hbb-b1P02088 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hbb-b1P02088 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hbb-b1P02088 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hbb-b1P02088 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.95■□□□□ 0.62
Hbb-b1P02088 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hbb-b1P02088 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hbb-b1P02088 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hbb-b1P02088 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hbb-b1P02088 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hbb-b1P02088 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hbb-b1P02088 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hbb-b1P02088 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hbb-b1P02088 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hbb-b1P02088 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hbb-b1P02088 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hbb-b1P02088 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.86■□□□□ 0.61
Hbb-b1P02088 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hbb-b1P02088 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hbb-b1P02088 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hbb-b1P02088 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hbb-b1P02088 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hbb-b1P02088 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hbb-b1P02088 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
Hbb-b1P02088 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hbb-b1P02088 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hbb-b1P02088 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hbb-b1P02088 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hbb-b1P02088 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hbb-b1P02088 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hbb-b1P02088 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hbb-b1P02088 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hbb-b1P02088 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hbb-b1P02088 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.7■□□□□ 0.58
Hbb-b1P02088 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hbb-b1P02088 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hbb-b1P02088 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hbb-b1P02088 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.68■□□□□ 0.58
Hbb-b1P02088 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.67■□□□□ 0.58
Hbb-b1P02088 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hbb-b1P02088 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hbb-b1P02088 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hbb-b1P02088 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hbb-b1P02088 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hbb-b1P02088 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hbb-b1P02088 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hbb-b1P02088 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hbb-b1P02088 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hbb-b1P02088 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hbb-b1P02088 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hbb-b1P02088 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hbb-b1P02088 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hbb-b1P02088 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Hbb-b1P02088 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hbb-b1P02088 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbb-b1P02088 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hbb-b1P02088 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hbb-b1P02088 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hbb-b1P02088 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hbb-b1P02088 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Hbb-b1P02088 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbb-b1P02088 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbb-b1P02088 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.49■□□□□ 0.55
Hbb-b1P02088 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hbb-b1P02088 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hbb-b1P02088 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hbb-b1P02088 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hbb-b1P02088 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hbb-b1P02088 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hbb-b1P02088 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hbb-b1P02088 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Hbb-b1P02088 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hbb-b1P02088 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hbb-b1P02088 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hbb-b1P02088 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hbb-b1P02088 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Hbb-b1P02088 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hbb-b1P02088 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hbb-b1P02088 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hbb-b1P02088 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms