Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.2■■□□□ 1.46
Igh-VJ558P01758 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Igh-VJ558P01758 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Igh-VJ558P01758 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Igh-VJ558P01758 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Igh-VJ558P01758 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Igh-VJ558P01758 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.11■■□□□ 1.45
Igh-VJ558P01758 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Igh-VJ558P01758 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Igh-VJ558P01758 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Igh-VJ558P01758 Rab21-202ENSMUST00000218831 843 ntBASIC24.04■■□□□ 1.44
Igh-VJ558P01758 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Igh-VJ558P01758 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Igh-VJ558P01758 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Igh-VJ558P01758 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Igh-VJ558P01758 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Igh-VJ558P01758 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.88■■□□□ 1.41
Igh-VJ558P01758 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Igh-VJ558P01758 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.87■■□□□ 1.41
Igh-VJ558P01758 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Igh-VJ558P01758 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Igh-VJ558P01758 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
Igh-VJ558P01758 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Igh-VJ558P01758 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Igh-VJ558P01758 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Igh-VJ558P01758 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.78■■□□□ 1.4
Igh-VJ558P01758 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Igh-VJ558P01758 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Igh-VJ558P01758 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.74■■□□□ 1.39
Igh-VJ558P01758 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Igh-VJ558P01758 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Igh-VJ558P01758 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.73■■□□□ 1.39
Igh-VJ558P01758 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Igh-VJ558P01758 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Igh-VJ558P01758 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.71■■□□□ 1.39
Igh-VJ558P01758 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Igh-VJ558P01758 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Igh-VJ558P01758 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Igh-VJ558P01758 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Igh-VJ558P01758 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Igh-VJ558P01758 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Igh-VJ558P01758 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Igh-VJ558P01758 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Igh-VJ558P01758 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Igh-VJ558P01758 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Igh-VJ558P01758 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Igh-VJ558P01758 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Igh-VJ558P01758 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Igh-VJ558P01758 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Igh-VJ558P01758 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.52■■□□□ 1.36
Igh-VJ558P01758 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Igh-VJ558P01758 Gm25262-201ENSMUST00000174934 133 ntBASIC23.51■■□□□ 1.35
Igh-VJ558P01758 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Igh-VJ558P01758 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.49■■□□□ 1.35
Igh-VJ558P01758 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Igh-VJ558P01758 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Igh-VJ558P01758 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Igh-VJ558P01758 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Igh-VJ558P01758 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Igh-VJ558P01758 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Igh-VJ558P01758 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Igh-VJ558P01758 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Igh-VJ558P01758 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Igh-VJ558P01758 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Igh-VJ558P01758 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Igh-VJ558P01758 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igh-VJ558P01758 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.22■■□□□ 1.31
Igh-VJ558P01758 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Igh-VJ558P01758 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.2■■□□□ 1.3
Igh-VJ558P01758 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igh-VJ558P01758 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Igh-VJ558P01758 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Igh-VJ558P01758 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Igh-VJ558P01758 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igh-VJ558P01758 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.15■■□□□ 1.3
Igh-VJ558P01758 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Igh-VJ558P01758 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Igh-VJ558P01758 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.1■■□□□ 1.29
Igh-VJ558P01758 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Igh-VJ558P01758 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.1■■□□□ 1.29
Igh-VJ558P01758 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Igh-VJ558P01758 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Igh-VJ558P01758 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Igh-VJ558P01758 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Igh-VJ558P01758 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igh-VJ558P01758 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Igh-VJ558P01758 Mipep-204ENSMUST00000225043 1548 ntBASIC23.07■■□□□ 1.28
Igh-VJ558P01758 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Igh-VJ558P01758 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Igh-VJ558P01758 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.01■■□□□ 1.27
Igh-VJ558P01758 Gm17082-201ENSMUST00000166043 1091 ntBASIC23■■□□□ 1.27
Igh-VJ558P01758 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Igh-VJ558P01758 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Igh-VJ558P01758 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.96■■□□□ 1.27
Igh-VJ558P01758 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.95■■□□□ 1.26
Igh-VJ558P01758 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.95■■□□□ 1.26
Igh-VJ558P01758 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igh-VJ558P01758 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igh-VJ558P01758 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Igh-VJ558P01758 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms