Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,53■■■□□ 2,32
Syn1O88935 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,51■■■□□ 2,31
Syn1O88935 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,5■■■□□ 2,31
Syn1O88935 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Syn1O88935 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Syn1O88935 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Syn1O88935 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29,43■■■□□ 2,3
Syn1O88935 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,42■■■□□ 2,3
Syn1O88935 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29,39■■■□□ 2,3
Syn1O88935 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,38■■■□□ 2,29
Syn1O88935 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29,36■■■□□ 2,29
Syn1O88935 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,36■■■□□ 2,29
Syn1O88935 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Syn1O88935 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29,31■■■□□ 2,28
Syn1O88935 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Syn1O88935 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29,14■■■□□ 2,26
Syn1O88935 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,1■■■□□ 2,25
Syn1O88935 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29,09■■■□□ 2,25
Syn1O88935 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Syn1O88935 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Syn1O88935 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Syn1O88935 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,02■■■□□ 2,24
Syn1O88935 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29,02■■■□□ 2,24
Syn1O88935 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29,01■■■□□ 2,23
Syn1O88935 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Syn1O88935 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28,98■■■□□ 2,23
Syn1O88935 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Syn1O88935 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28,92■■■□□ 2,22
Syn1O88935 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28,89■■■□□ 2,21
Syn1O88935 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28,87■■■□□ 2,21
Syn1O88935 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
Syn1O88935 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28,83■■■□□ 2,21
Syn1O88935 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
Syn1O88935 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28,81■■■□□ 2,2
Syn1O88935 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28,74■■■□□ 2,19
Syn1O88935 AC166822.3-201ENSMUST00000227394 661 ntBASIC28,74■■■□□ 2,19
Syn1O88935 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Syn1O88935 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
Syn1O88935 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28,7■■■□□ 2,18
Syn1O88935 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28,69■■■□□ 2,18
Syn1O88935 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Syn1O88935 Tdp2-203ENSMUST00000223804 1136 ntBASIC28,66■■■□□ 2,18
Syn1O88935 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Syn1O88935 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28,64■■■□□ 2,18
Syn1O88935 Gm16148-201ENSMUST00000119653 893 ntBASIC28,63■■■□□ 2,17
Syn1O88935 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Syn1O88935 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Syn1O88935 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28,6■■■□□ 2,17
Syn1O88935 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Syn1O88935 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Syn1O88935 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Syn1O88935 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28,55■■■□□ 2,16
Syn1O88935 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Syn1O88935 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,52■■■□□ 2,16
Syn1O88935 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28,51■■■□□ 2,15
Syn1O88935 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Syn1O88935 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28,47■■■□□ 2,15
Syn1O88935 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28,47■■■□□ 2,15
Syn1O88935 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,45■■■□□ 2,14
Syn1O88935 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28,44■■■□□ 2,14
Syn1O88935 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28,44■■■□□ 2,14
Syn1O88935 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28,44■■■□□ 2,14
Syn1O88935 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28,42■■■□□ 2,14
Syn1O88935 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Syn1O88935 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Syn1O88935 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Syn1O88935 Gm5987-201ENSMUST00000196433 1151 ntBASIC28,39■■■□□ 2,14
Syn1O88935 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Syn1O88935 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28,37■■■□□ 2,13
Syn1O88935 AL845457.1-201ENSMUST00000197244 68 ntBASIC28,36■■■□□ 2,13
Syn1O88935 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28,35■■■□□ 2,13
Syn1O88935 Gm45855-201ENSMUST00000212546 880 ntBASIC28,32■■■□□ 2,12
Syn1O88935 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28,3■■■□□ 2,12
Syn1O88935 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Syn1O88935 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28,27■■■□□ 2,12
Syn1O88935 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28,26■■■□□ 2,12
Syn1O88935 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,26■■■□□ 2,11
Syn1O88935 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28,25■■■□□ 2,11
Syn1O88935 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28,22■■■□□ 2,11
Syn1O88935 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28,22■■■□□ 2,11
Syn1O88935 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28,2■■■□□ 2,1
Syn1O88935 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,2■■■□□ 2,1
Syn1O88935 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28,19■■■□□ 2,1
Syn1O88935 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,17■■■□□ 2,1
Syn1O88935 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28,16■■■□□ 2,1
Syn1O88935 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28,15■■■□□ 2,1
Syn1O88935 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28,14■■■□□ 2,09
Syn1O88935 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,13■■■□□ 2,09
Syn1O88935 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28,12■■■□□ 2,09
Syn1O88935 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28,12■■■□□ 2,09
Syn1O88935 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28,11■■■□□ 2,09
Syn1O88935 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Syn1O88935 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Syn1O88935 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Syn1O88935 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28,07■■■□□ 2,08
Syn1O88935 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Syn1O88935 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Syn1O88935 Peli2-204ENSMUST00000226513 1320 ntBASIC28,03■■■□□ 2,08
Syn1O88935 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28,03■■■□□ 2,08
Syn1O88935 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28,03■■■□□ 2,08
Retrieved 100 of 76,532 protein–RNA pairs in 13,2 ms