Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Tnfrsf17O88472 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.83■■□□□ 1.89
Tnfrsf17O88472 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
Tnfrsf17O88472 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tnfrsf17O88472 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Tnfrsf17O88472 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Tnfrsf17O88472 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.76■■□□□ 1.87
Tnfrsf17O88472 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Tnfrsf17O88472 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.72■■□□□ 1.87
Tnfrsf17O88472 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.68■■□□□ 1.86
Tnfrsf17O88472 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tnfrsf17O88472 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Tnfrsf17O88472 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Tnfrsf17O88472 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.49■■□□□ 1.83
Tnfrsf17O88472 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tnfrsf17O88472 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tnfrsf17O88472 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Tnfrsf17O88472 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Tnfrsf17O88472 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.44■■□□□ 1.82
Tnfrsf17O88472 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Tnfrsf17O88472 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Tnfrsf17O88472 Psd-208ENSMUST00000224556 2034 ntBASIC26.39■■□□□ 1.82
Tnfrsf17O88472 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Tnfrsf17O88472 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Tnfrsf17O88472 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tnfrsf17O88472 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tnfrsf17O88472 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.29■■□□□ 1.8
Tnfrsf17O88472 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Tnfrsf17O88472 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tnfrsf17O88472 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.21■■□□□ 1.79
Tnfrsf17O88472 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.19■■□□□ 1.78
Tnfrsf17O88472 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Tnfrsf17O88472 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.14■■□□□ 1.78
Tnfrsf17O88472 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tnfrsf17O88472 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tnfrsf17O88472 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Tnfrsf17O88472 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tnfrsf17O88472 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Tnfrsf17O88472 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tnfrsf17O88472 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Tnfrsf17O88472 Gm16148-201ENSMUST00000119653 893 ntBASIC26.06■■□□□ 1.76
Tnfrsf17O88472 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Tnfrsf17O88472 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tnfrsf17O88472 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26■■□□□ 1.75
Tnfrsf17O88472 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Tnfrsf17O88472 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Tnfrsf17O88472 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Tnfrsf17O88472 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.97■■□□□ 1.75
Tnfrsf17O88472 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Tnfrsf17O88472 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Tnfrsf17O88472 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Tnfrsf17O88472 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Tnfrsf17O88472 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Tnfrsf17O88472 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Tnfrsf17O88472 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tnfrsf17O88472 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
Tnfrsf17O88472 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.87■■□□□ 1.73
Tnfrsf17O88472 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Tnfrsf17O88472 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Tnfrsf17O88472 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.84■■□□□ 1.73
Tnfrsf17O88472 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Tnfrsf17O88472 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.82■■□□□ 1.72
Tnfrsf17O88472 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.78■■□□□ 1.72
Tnfrsf17O88472 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.78■■□□□ 1.72
Tnfrsf17O88472 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Tnfrsf17O88472 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tnfrsf17O88472 Gm45855-201ENSMUST00000212546 880 ntBASIC25.77■■□□□ 1.72
Tnfrsf17O88472 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Tnfrsf17O88472 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Tnfrsf17O88472 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Tnfrsf17O88472 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.72■■□□□ 1.71
Tnfrsf17O88472 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Tnfrsf17O88472 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Tnfrsf17O88472 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnfrsf17O88472 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.65■■□□□ 1.7
Tnfrsf17O88472 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Tnfrsf17O88472 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Tnfrsf17O88472 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Tnfrsf17O88472 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Tnfrsf17O88472 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Tnfrsf17O88472 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.61■■□□□ 1.69
Tnfrsf17O88472 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tnfrsf17O88472 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tnfrsf17O88472 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
Tnfrsf17O88472 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Tnfrsf17O88472 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Tnfrsf17O88472 Peli2-204ENSMUST00000226513 1320 ntBASIC25.56■■□□□ 1.68
Tnfrsf17O88472 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.55■■□□□ 1.68
Tnfrsf17O88472 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Tnfrsf17O88472 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.53■■□□□ 1.68
Tnfrsf17O88472 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.52■■□□□ 1.68
Tnfrsf17O88472 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Tnfrsf17O88472 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Tnfrsf17O88472 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Tnfrsf17O88472 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tnfrsf17O88472 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Tnfrsf17O88472 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Tnfrsf17O88472 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Tnfrsf17O88472 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Tnfrsf17O88472 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms