Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.37■■■□□ 2.61
Atp9aO70228 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.37■■■□□ 2.61
Atp9aO70228 Gm8109-201ENSMUST00000194076 746 ntBASIC31.35■■■□□ 2.61
Atp9aO70228 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Atp9aO70228 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
Atp9aO70228 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Atp9aO70228 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Atp9aO70228 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Atp9aO70228 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Atp9aO70228 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Atp9aO70228 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Atp9aO70228 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Atp9aO70228 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Atp9aO70228 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Atp9aO70228 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.14■■■□□ 2.58
Atp9aO70228 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Atp9aO70228 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.07■■■□□ 2.56
Atp9aO70228 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atp9aO70228 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Atp9aO70228 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Atp9aO70228 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.02■■■□□ 2.56
Atp9aO70228 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
Atp9aO70228 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
Atp9aO70228 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Atp9aO70228 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Atp9aO70228 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Atp9aO70228 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Atp9aO70228 Gm27322-201ENSMUST00000184007 104 ntBASIC30.83■■■□□ 2.53
Atp9aO70228 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
Atp9aO70228 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Atp9aO70228 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Atp9aO70228 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Atp9aO70228 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.68■■■□□ 2.5
Atp9aO70228 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atp9aO70228 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Atp9aO70228 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Atp9aO70228 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Atp9aO70228 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atp9aO70228 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.55■■■□□ 2.48
Atp9aO70228 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Atp9aO70228 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
Atp9aO70228 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Atp9aO70228 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Atp9aO70228 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Atp9aO70228 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.48■■■□□ 2.47
Atp9aO70228 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.48■■■□□ 2.47
Atp9aO70228 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atp9aO70228 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Atp9aO70228 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Atp9aO70228 Gm24804-201ENSMUST00000174982 85 ntBASIC30.4■■■□□ 2.46
Atp9aO70228 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Atp9aO70228 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Atp9aO70228 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.37■■■□□ 2.45
Atp9aO70228 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Atp9aO70228 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.36■■■□□ 2.45
Atp9aO70228 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.35■■■□□ 2.45
Atp9aO70228 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Atp9aO70228 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.32■■■□□ 2.44
Atp9aO70228 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atp9aO70228 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.29■■■□□ 2.44
Atp9aO70228 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
Atp9aO70228 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Atp9aO70228 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Atp9aO70228 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Atp9aO70228 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Atp9aO70228 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Atp9aO70228 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Atp9aO70228 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Atp9aO70228 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Atp9aO70228 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Atp9aO70228 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Atp9aO70228 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Atp9aO70228 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Atp9aO70228 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.91■■■□□ 2.38
Atp9aO70228 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Atp9aO70228 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Atp9aO70228 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Atp9aO70228 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Atp9aO70228 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Atp9aO70228 Mipep-204ENSMUST00000225043 1548 ntBASIC29.87■■■□□ 2.37
Atp9aO70228 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Atp9aO70228 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Atp9aO70228 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Atp9aO70228 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Atp9aO70228 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Atp9aO70228 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Atp9aO70228 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Atp9aO70228 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Atp9aO70228 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Atp9aO70228 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Atp9aO70228 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Atp9aO70228 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Atp9aO70228 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Atp9aO70228 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Atp9aO70228 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
Atp9aO70228 Peli2-204ENSMUST00000226513 1320 ntBASIC29.64■■■□□ 2.34
Atp9aO70228 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Atp9aO70228 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Atp9aO70228 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Atp9aO70228 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms