Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Nr1i3O35627 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29,92■■■□□ 2,38
Nr1i3O35627 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Nr1i3O35627 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29,82■■■□□ 2,36
Nr1i3O35627 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29,77■■■□□ 2,36
Nr1i3O35627 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Nr1i3O35627 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29,73■■■□□ 2,35
Nr1i3O35627 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29,7■■■□□ 2,34
Nr1i3O35627 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29,69■■■□□ 2,34
Nr1i3O35627 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29,68■■■□□ 2,34
Nr1i3O35627 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,33
Nr1i3O35627 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
Nr1i3O35627 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
Nr1i3O35627 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29,61■■■□□ 2,33
Nr1i3O35627 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29,6■■■□□ 2,33
Nr1i3O35627 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,6■■■□□ 2,33
Nr1i3O35627 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29,59■■■□□ 2,33
Nr1i3O35627 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Nr1i3O35627 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29,51■■■□□ 2,31
Nr1i3O35627 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Nr1i3O35627 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Nr1i3O35627 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Nr1i3O35627 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29,43■■■□□ 2,3
Nr1i3O35627 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Nr1i3O35627 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29,41■■■□□ 2,3
Nr1i3O35627 Rab21-202ENSMUST00000218831 843 ntBASIC29,36■■■□□ 2,29
Nr1i3O35627 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29,36■■■□□ 2,29
Nr1i3O35627 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29,34■■■□□ 2,29
Nr1i3O35627 Zfp131-207ENSMUST00000224946 1783 ntBASIC29,33■■■□□ 2,29
Nr1i3O35627 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29,26■■■□□ 2,27
Nr1i3O35627 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,24■■■□□ 2,27
Nr1i3O35627 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
Nr1i3O35627 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29,21■■■□□ 2,27
Nr1i3O35627 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,21■■■□□ 2,27
Nr1i3O35627 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Nr1i3O35627 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
Nr1i3O35627 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29,16■■■□□ 2,26
Nr1i3O35627 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29,14■■■□□ 2,26
Nr1i3O35627 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Nr1i3O35627 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,13■■■□□ 2,25
Nr1i3O35627 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29,13■■■□□ 2,25
Nr1i3O35627 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,09■■■□□ 2,25
Nr1i3O35627 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29,07■■■□□ 2,24
Nr1i3O35627 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,05■■■□□ 2,24
Nr1i3O35627 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Nr1i3O35627 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29,05■■■□□ 2,24
Nr1i3O35627 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29,01■■■□□ 2,24
Nr1i3O35627 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,01■■■□□ 2,23
Nr1i3O35627 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29,01■■■□□ 2,23
Nr1i3O35627 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Nr1i3O35627 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2,23
Nr1i3O35627 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29■■■□□ 2,23
Nr1i3O35627 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28,98■■■□□ 2,23
Nr1i3O35627 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28,97■■■□□ 2,23
Nr1i3O35627 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Nr1i3O35627 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28,96■■■□□ 2,23
Nr1i3O35627 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28,95■■■□□ 2,22
Nr1i3O35627 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28,94■■■□□ 2,22
Nr1i3O35627 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Nr1i3O35627 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Nr1i3O35627 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28,89■■■□□ 2,22
Nr1i3O35627 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28,89■■■□□ 2,22
Nr1i3O35627 Gm2415-204ENSMUST00000190235 2004 ntBASIC28,87■■■□□ 2,21
Nr1i3O35627 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28,86■■■□□ 2,21
Nr1i3O35627 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Nr1i3O35627 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28,83■■■□□ 2,21
Nr1i3O35627 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Nr1i3O35627 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Nr1i3O35627 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Nr1i3O35627 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28,75■■■□□ 2,19
Nr1i3O35627 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Nr1i3O35627 Gm6658-202ENSMUST00000209493 1885 ntBASIC28,67■■■□□ 2,18
Nr1i3O35627 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28,66■■■□□ 2,18
Nr1i3O35627 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28,65■■■□□ 2,18
Nr1i3O35627 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Nr1i3O35627 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28,64■■■□□ 2,18
Nr1i3O35627 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Nr1i3O35627 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Nr1i3O35627 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Nr1i3O35627 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
Nr1i3O35627 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28,57■■■□□ 2,16
Nr1i3O35627 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28,56■■■□□ 2,16
Nr1i3O35627 AL845457.1-201ENSMUST00000197244 68 ntBASIC28,53■■■□□ 2,16
Nr1i3O35627 Gm25262-201ENSMUST00000174934 133 ntBASIC28,51■■■□□ 2,15
Nr1i3O35627 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Nr1i3O35627 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,49■■■□□ 2,15
Nr1i3O35627 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Nr1i3O35627 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Nr1i3O35627 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28,45■■■□□ 2,15
Nr1i3O35627 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28,45■■■□□ 2,14
Nr1i3O35627 Mipep-204ENSMUST00000225043 1548 ntBASIC28,44■■■□□ 2,14
Nr1i3O35627 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Nr1i3O35627 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28,34■■■□□ 2,13
Nr1i3O35627 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Nr1i3O35627 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Nr1i3O35627 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28,32■■■□□ 2,12
Nr1i3O35627 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28,31■■■□□ 2,12
Nr1i3O35627 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28,3■■■□□ 2,12
Nr1i3O35627 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28,29■■■□□ 2,12
Nr1i3O35627 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28,27■■■□□ 2,12
Retrieved 100 of 76,532 protein–RNA pairs in 11,9 ms