Protein–RNA interactions for Protein: O08529

Capn2, Calpain-2 catalytic subunit, mousemouse

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn2O08529 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Capn2O08529 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
Capn2O08529 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Capn2O08529 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
Capn2O08529 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Capn2O08529 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.62■■■□□ 2.49
Capn2O08529 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.61■■■□□ 2.49
Capn2O08529 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Capn2O08529 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Capn2O08529 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Capn2O08529 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.48■■■□□ 2.47
Capn2O08529 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Capn2O08529 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.45■■■□□ 2.47
Capn2O08529 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.45■■■□□ 2.47
Capn2O08529 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
Capn2O08529 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.34■■■□□ 2.45
Capn2O08529 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Capn2O08529 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.31■■■□□ 2.44
Capn2O08529 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Capn2O08529 Zfp131-205ENSMUST00000223812 663 ntBASIC30.3■■■□□ 2.44
Capn2O08529 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Capn2O08529 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Capn2O08529 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Capn2O08529 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Capn2O08529 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Capn2O08529 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Capn2O08529 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Capn2O08529 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Capn2O08529 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Capn2O08529 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Capn2O08529 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.09■■■□□ 2.41
Capn2O08529 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Capn2O08529 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Capn2O08529 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Capn2O08529 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Capn2O08529 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Capn2O08529 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Capn2O08529 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Capn2O08529 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Capn2O08529 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Capn2O08529 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Capn2O08529 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.9■■■□□ 2.38
Capn2O08529 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Capn2O08529 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.89■■■□□ 2.38
Capn2O08529 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Capn2O08529 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Capn2O08529 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Capn2O08529 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Capn2O08529 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.85■■■□□ 2.37
Capn2O08529 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Capn2O08529 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Capn2O08529 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Capn2O08529 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Capn2O08529 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.8■■■□□ 2.36
Capn2O08529 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.78■■■□□ 2.36
Capn2O08529 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
Capn2O08529 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Capn2O08529 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Capn2O08529 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.66■■■□□ 2.34
Capn2O08529 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Capn2O08529 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Capn2O08529 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.65■■■□□ 2.34
Capn2O08529 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Capn2O08529 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Capn2O08529 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
Capn2O08529 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Capn2O08529 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Capn2O08529 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Capn2O08529 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
Capn2O08529 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.56■■■□□ 2.32
Capn2O08529 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Capn2O08529 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.54■■■□□ 2.32
Capn2O08529 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Capn2O08529 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Capn2O08529 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Capn2O08529 Gm16148-201ENSMUST00000119653 893 ntBASIC29.46■■■□□ 2.31
Capn2O08529 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Capn2O08529 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Capn2O08529 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Capn2O08529 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Capn2O08529 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.38■■■□□ 2.29
Capn2O08529 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Capn2O08529 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Capn2O08529 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.33■■■□□ 2.29
Capn2O08529 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.32■■■□□ 2.28
Capn2O08529 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.3■■■□□ 2.28
Capn2O08529 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Capn2O08529 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Capn2O08529 Zxda-201ENSMUST00000117281 2621 ntBASIC29.28■■■□□ 2.28
Capn2O08529 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Capn2O08529 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Capn2O08529 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.24■■■□□ 2.27
Capn2O08529 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Capn2O08529 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Capn2O08529 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Capn2O08529 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Capn2O08529 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Capn2O08529 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Capn2O08529 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.14■■■□□ 2.26
Capn2O08529 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms