Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
B020004C17RikJ3QP07 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
B020004C17RikJ3QP07 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.37■■■□□ 2.77
B020004C17RikJ3QP07 Gm24804-201ENSMUST00000174982 85 ntBASIC32.36■■■□□ 2.77
B020004C17RikJ3QP07 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
B020004C17RikJ3QP07 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
B020004C17RikJ3QP07 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
B020004C17RikJ3QP07 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
B020004C17RikJ3QP07 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.29■■■□□ 2.76
B020004C17RikJ3QP07 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
B020004C17RikJ3QP07 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
B020004C17RikJ3QP07 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
B020004C17RikJ3QP07 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.16■■■□□ 2.74
B020004C17RikJ3QP07 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.16■■■□□ 2.74
B020004C17RikJ3QP07 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.15■■■□□ 2.74
B020004C17RikJ3QP07 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
B020004C17RikJ3QP07 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
B020004C17RikJ3QP07 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
B020004C17RikJ3QP07 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.96■■■□□ 2.71
B020004C17RikJ3QP07 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
B020004C17RikJ3QP07 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
B020004C17RikJ3QP07 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
B020004C17RikJ3QP07 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
B020004C17RikJ3QP07 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
B020004C17RikJ3QP07 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.78■■■□□ 2.68
B020004C17RikJ3QP07 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
B020004C17RikJ3QP07 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
B020004C17RikJ3QP07 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
B020004C17RikJ3QP07 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
B020004C17RikJ3QP07 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
B020004C17RikJ3QP07 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
B020004C17RikJ3QP07 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
B020004C17RikJ3QP07 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
B020004C17RikJ3QP07 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.67■■■□□ 2.66
B020004C17RikJ3QP07 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
B020004C17RikJ3QP07 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
B020004C17RikJ3QP07 Zfp131-205ENSMUST00000223812 663 ntBASIC31.64■■■□□ 2.66
B020004C17RikJ3QP07 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.62■■■□□ 2.65
B020004C17RikJ3QP07 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
B020004C17RikJ3QP07 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.6■■■□□ 2.65
B020004C17RikJ3QP07 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
B020004C17RikJ3QP07 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
B020004C17RikJ3QP07 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
B020004C17RikJ3QP07 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
B020004C17RikJ3QP07 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.51■■■□□ 2.63
B020004C17RikJ3QP07 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
B020004C17RikJ3QP07 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
B020004C17RikJ3QP07 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
B020004C17RikJ3QP07 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
B020004C17RikJ3QP07 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
B020004C17RikJ3QP07 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
B020004C17RikJ3QP07 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
B020004C17RikJ3QP07 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.31■■■□□ 2.6
B020004C17RikJ3QP07 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
B020004C17RikJ3QP07 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
B020004C17RikJ3QP07 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.23■■■□□ 2.59
B020004C17RikJ3QP07 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
B020004C17RikJ3QP07 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
B020004C17RikJ3QP07 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
B020004C17RikJ3QP07 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
B020004C17RikJ3QP07 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
B020004C17RikJ3QP07 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
B020004C17RikJ3QP07 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
B020004C17RikJ3QP07 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
B020004C17RikJ3QP07 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
B020004C17RikJ3QP07 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
B020004C17RikJ3QP07 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
B020004C17RikJ3QP07 Gm16148-201ENSMUST00000119653 893 ntBASIC31.08■■■□□ 2.57
B020004C17RikJ3QP07 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.07■■■□□ 2.56
B020004C17RikJ3QP07 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
B020004C17RikJ3QP07 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
B020004C17RikJ3QP07 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
B020004C17RikJ3QP07 Zfp131-207ENSMUST00000224946 1783 ntBASIC31■■■□□ 2.55
B020004C17RikJ3QP07 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
B020004C17RikJ3QP07 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
B020004C17RikJ3QP07 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
B020004C17RikJ3QP07 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
B020004C17RikJ3QP07 Peli2-204ENSMUST00000226513 1320 ntBASIC30.9■■■□□ 2.54
B020004C17RikJ3QP07 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
B020004C17RikJ3QP07 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.87■■■□□ 2.53
B020004C17RikJ3QP07 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
B020004C17RikJ3QP07 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
B020004C17RikJ3QP07 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.85■■■□□ 2.53
B020004C17RikJ3QP07 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
B020004C17RikJ3QP07 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
B020004C17RikJ3QP07 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
B020004C17RikJ3QP07 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
B020004C17RikJ3QP07 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
B020004C17RikJ3QP07 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
B020004C17RikJ3QP07 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
B020004C17RikJ3QP07 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
B020004C17RikJ3QP07 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.72■■■□□ 2.51
B020004C17RikJ3QP07 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
B020004C17RikJ3QP07 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.69■■■□□ 2.5
B020004C17RikJ3QP07 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
B020004C17RikJ3QP07 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
B020004C17RikJ3QP07 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.67■■■□□ 2.5
B020004C17RikJ3QP07 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
B020004C17RikJ3QP07 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.64■■■□□ 2.5
B020004C17RikJ3QP07 Mipep-204ENSMUST00000225043 1548 ntBASIC30.62■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms