Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Atf6F6VAN0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.47■■■□□ 2.15
Atf6F6VAN0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Atf6F6VAN0 Rab21-202ENSMUST00000218831 843 ntBASIC28.36■■■□□ 2.13
Atf6F6VAN0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Atf6F6VAN0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.33■■■□□ 2.13
Atf6F6VAN0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Atf6F6VAN0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Atf6F6VAN0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Atf6F6VAN0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Atf6F6VAN0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Atf6F6VAN0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Atf6F6VAN0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.18■■■□□ 2.1
Atf6F6VAN0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Atf6F6VAN0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Atf6F6VAN0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Atf6F6VAN0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Atf6F6VAN0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Atf6F6VAN0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atf6F6VAN0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.99■■■□□ 2.07
Atf6F6VAN0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Atf6F6VAN0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Atf6F6VAN0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.98■■■□□ 2.07
Atf6F6VAN0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.96■■■□□ 2.07
Atf6F6VAN0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.96■■■□□ 2.07
Atf6F6VAN0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Atf6F6VAN0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Atf6F6VAN0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
Atf6F6VAN0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Atf6F6VAN0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
Atf6F6VAN0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
Atf6F6VAN0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Atf6F6VAN0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Atf6F6VAN0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Atf6F6VAN0 Gm25262-201ENSMUST00000174934 133 ntBASIC27.84■■■□□ 2.05
Atf6F6VAN0 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.83■■■□□ 2.05
Atf6F6VAN0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Atf6F6VAN0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Atf6F6VAN0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Atf6F6VAN0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Atf6F6VAN0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Atf6F6VAN0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Atf6F6VAN0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Atf6F6VAN0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Atf6F6VAN0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Atf6F6VAN0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Atf6F6VAN0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Atf6F6VAN0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Atf6F6VAN0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Atf6F6VAN0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.59■■■□□ 2.01
Atf6F6VAN0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atf6F6VAN0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atf6F6VAN0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.52■■■□□ 2
Atf6F6VAN0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Atf6F6VAN0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Atf6F6VAN0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Atf6F6VAN0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Atf6F6VAN0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.39■■□□□ 1.98
Atf6F6VAN0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Atf6F6VAN0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Atf6F6VAN0 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.34■■□□□ 1.97
Atf6F6VAN0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Atf6F6VAN0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.32■■□□□ 1.96
Atf6F6VAN0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Atf6F6VAN0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.29■■□□□ 1.96
Atf6F6VAN0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Atf6F6VAN0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Atf6F6VAN0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Atf6F6VAN0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atf6F6VAN0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Atf6F6VAN0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Atf6F6VAN0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.21■■□□□ 1.95
Atf6F6VAN0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Atf6F6VAN0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Atf6F6VAN0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Atf6F6VAN0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Atf6F6VAN0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Atf6F6VAN0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Atf6F6VAN0 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.13■■□□□ 1.93
Atf6F6VAN0 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.12■■□□□ 1.93
Atf6F6VAN0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Atf6F6VAN0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Atf6F6VAN0 Mipep-204ENSMUST00000225043 1548 ntBASIC27.1■■□□□ 1.93
Atf6F6VAN0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Atf6F6VAN0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.07■■□□□ 1.92
Atf6F6VAN0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.06■■□□□ 1.92
Atf6F6VAN0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Atf6F6VAN0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Atf6F6VAN0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Atf6F6VAN0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
Atf6F6VAN0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Atf6F6VAN0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Atf6F6VAN0 Gm27322-201ENSMUST00000184007 104 ntBASIC27.03■■□□□ 1.92
Atf6F6VAN0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Atf6F6VAN0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.98■■□□□ 1.91
Atf6F6VAN0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Atf6F6VAN0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Atf6F6VAN0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.94■■□□□ 1.9
Atf6F6VAN0 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.93■■□□□ 1.9
Atf6F6VAN0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms