Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC40.43■■■■■ 4.06
Zc3h13E9Q784 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Zc3h13E9Q784 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Zc3h13E9Q784 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
Zc3h13E9Q784 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC40.39■■■■■ 4.06
Zc3h13E9Q784 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
Zc3h13E9Q784 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
Zc3h13E9Q784 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC40.34■■■■■ 4.05
Zc3h13E9Q784 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC40.33■■■■■ 4.05
Zc3h13E9Q784 Gm27322-201ENSMUST00000184007 104 ntBASIC40.3■■■■■ 4.04
Zc3h13E9Q784 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC40.29■■■■■ 4.04
Zc3h13E9Q784 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Zc3h13E9Q784 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
Zc3h13E9Q784 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Zc3h13E9Q784 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Zc3h13E9Q784 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC40.13■■■■■ 4.02
Zc3h13E9Q784 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
Zc3h13E9Q784 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Zc3h13E9Q784 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Zc3h13E9Q784 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Zc3h13E9Q784 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
Zc3h13E9Q784 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC39.92■■■■□ 3.98
Zc3h13E9Q784 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
Zc3h13E9Q784 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Zc3h13E9Q784 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Zc3h13E9Q784 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Zc3h13E9Q784 Gm42596-201ENSMUST00000196305 1958 ntBASIC39.83■■■■□ 3.97
Zc3h13E9Q784 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
Zc3h13E9Q784 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
Zc3h13E9Q784 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
Zc3h13E9Q784 Gm10524-201ENSMUST00000181931 1893 ntBASIC39.67■■■■□ 3.94
Zc3h13E9Q784 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Zc3h13E9Q784 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Zc3h13E9Q784 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC39.61■■■■□ 3.93
Zc3h13E9Q784 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
Zc3h13E9Q784 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC39.57■■■■□ 3.93
Zc3h13E9Q784 CT025624.2-201ENSMUST00000223609 1909 ntBASIC39.55■■■■□ 3.92
Zc3h13E9Q784 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Zc3h13E9Q784 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Zc3h13E9Q784 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC39.45■■■■□ 3.91
Zc3h13E9Q784 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
Zc3h13E9Q784 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
Zc3h13E9Q784 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC39.38■■■■□ 3.89
Zc3h13E9Q784 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC39.34■■■■□ 3.89
Zc3h13E9Q784 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC39.33■■■■□ 3.89
Zc3h13E9Q784 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Zc3h13E9Q784 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Zc3h13E9Q784 AC166822.3-201ENSMUST00000227394 661 ntBASIC39.29■■■■□ 3.88
Zc3h13E9Q784 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
Zc3h13E9Q784 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
Zc3h13E9Q784 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC39.26■■■■□ 3.87
Zc3h13E9Q784 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC39.21■■■■□ 3.87
Zc3h13E9Q784 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC39.2■■■■□ 3.87
Zc3h13E9Q784 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
Zc3h13E9Q784 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
Zc3h13E9Q784 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC39.17■■■■□ 3.86
Zc3h13E9Q784 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC39.17■■■■□ 3.86
Zc3h13E9Q784 AL845457.1-201ENSMUST00000197244 68 ntBASIC39.14■■■■□ 3.86
Zc3h13E9Q784 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.86
Zc3h13E9Q784 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
Zc3h13E9Q784 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC39.1■■■■□ 3.85
Zc3h13E9Q784 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC39.01■■■■□ 3.83
Zc3h13E9Q784 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC38.93■■■■□ 3.82
Zc3h13E9Q784 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC38.92■■■■□ 3.82
Zc3h13E9Q784 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC38.9■■■■□ 3.82
Zc3h13E9Q784 Tdp2-203ENSMUST00000223804 1136 ntBASIC38.89■■■■□ 3.82
Zc3h13E9Q784 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Zc3h13E9Q784 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Zc3h13E9Q784 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC38.81■■■■□ 3.8
Zc3h13E9Q784 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC38.81■■■■□ 3.8
Zc3h13E9Q784 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
Zc3h13E9Q784 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Zc3h13E9Q784 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
Zc3h13E9Q784 Gm16148-201ENSMUST00000119653 893 ntBASIC38.76■■■■□ 3.8
Zc3h13E9Q784 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC38.72■■■■□ 3.79
Zc3h13E9Q784 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
Zc3h13E9Q784 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC38.69■■■■□ 3.78
Zc3h13E9Q784 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Zc3h13E9Q784 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC38.67■■■■□ 3.78
Zc3h13E9Q784 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Zc3h13E9Q784 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC38.64■■■■□ 3.78
Zc3h13E9Q784 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC38.61■■■■□ 3.77
Zc3h13E9Q784 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Zc3h13E9Q784 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC38.59■■■■□ 3.77
Zc3h13E9Q784 Gm5987-201ENSMUST00000196433 1151 ntBASIC38.56■■■■□ 3.76
Zc3h13E9Q784 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC38.56■■■■□ 3.76
Zc3h13E9Q784 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Zc3h13E9Q784 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Zc3h13E9Q784 Zfp131-207ENSMUST00000224946 1783 ntBASIC38.51■■■■□ 3.76
Zc3h13E9Q784 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC38.5■■■■□ 3.75
Zc3h13E9Q784 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Zc3h13E9Q784 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Zc3h13E9Q784 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC38.45■■■■□ 3.75
Zc3h13E9Q784 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC38.44■■■■□ 3.74
Zc3h13E9Q784 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
Zc3h13E9Q784 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC38.41■■■■□ 3.74
Zc3h13E9Q784 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Zc3h13E9Q784 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
Zc3h13E9Q784 Gm45855-201ENSMUST00000212546 880 ntBASIC38.37■■■■□ 3.73
Zc3h13E9Q784 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC38.35■■■■□ 3.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms