Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.04■□□□□ 0.32
Herc1E9PZP8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Herc1E9PZP8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc1E9PZP8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Herc1E9PZP8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Herc1E9PZP8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Herc1E9PZP8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.95■□□□□ 0.3
Herc1E9PZP8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC16.95■□□□□ 0.3
Herc1E9PZP8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Herc1E9PZP8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herc1E9PZP8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc1E9PZP8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc1E9PZP8 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.88■□□□□ 0.29
Herc1E9PZP8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Herc1E9PZP8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc1E9PZP8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.83■□□□□ 0.29
Herc1E9PZP8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Herc1E9PZP8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Herc1E9PZP8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
Herc1E9PZP8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.77■□□□□ 0.28
Herc1E9PZP8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.77■□□□□ 0.27
Herc1E9PZP8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.75■□□□□ 0.27
Herc1E9PZP8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Herc1E9PZP8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Herc1E9PZP8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Herc1E9PZP8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Herc1E9PZP8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.7■□□□□ 0.26
Herc1E9PZP8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Herc1E9PZP8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herc1E9PZP8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.69■□□□□ 0.26
Herc1E9PZP8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Herc1E9PZP8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Herc1E9PZP8 Gm45855-201ENSMUST00000212546 880 ntBASIC16.68■□□□□ 0.26
Herc1E9PZP8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Herc1E9PZP8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.67■□□□□ 0.26
Herc1E9PZP8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herc1E9PZP8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Herc1E9PZP8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Herc1E9PZP8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Herc1E9PZP8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Herc1E9PZP8 Gm16148-201ENSMUST00000119653 893 ntBASIC16.59■□□□□ 0.25
Herc1E9PZP8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Herc1E9PZP8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Herc1E9PZP8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Herc1E9PZP8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Herc1E9PZP8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Herc1E9PZP8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Herc1E9PZP8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Herc1E9PZP8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Herc1E9PZP8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Herc1E9PZP8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Herc1E9PZP8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Herc1E9PZP8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Herc1E9PZP8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Herc1E9PZP8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Herc1E9PZP8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.48■□□□□ 0.23
Herc1E9PZP8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Herc1E9PZP8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Herc1E9PZP8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Herc1E9PZP8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Herc1E9PZP8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Herc1E9PZP8 Gm15039-201ENSMUST00000118914 875 ntBASIC16.43■□□□□ 0.22
Herc1E9PZP8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Herc1E9PZP8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.42■□□□□ 0.22
Herc1E9PZP8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Herc1E9PZP8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.4■□□□□ 0.22
Herc1E9PZP8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Herc1E9PZP8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Herc1E9PZP8 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.39■□□□□ 0.21
Herc1E9PZP8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Herc1E9PZP8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Herc1E9PZP8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.35■□□□□ 0.21
Herc1E9PZP8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Herc1E9PZP8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.31■□□□□ 0.2
Herc1E9PZP8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Herc1E9PZP8 Gm9397-201ENSMUST00000200125 605 ntBASIC16.3■□□□□ 0.2
Herc1E9PZP8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Herc1E9PZP8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Herc1E9PZP8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.28■□□□□ 0.2
Herc1E9PZP8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herc1E9PZP8 Gm8503-201ENSMUST00000118131 455 ntBASIC16.25■□□□□ 0.19
Herc1E9PZP8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herc1E9PZP8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Herc1E9PZP8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Herc1E9PZP8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Herc1E9PZP8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Herc1E9PZP8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Herc1E9PZP8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.19■□□□□ 0.18
Herc1E9PZP8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Herc1E9PZP8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Herc1E9PZP8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Herc1E9PZP8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Herc1E9PZP8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Herc1E9PZP8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.16■□□□□ 0.18
Herc1E9PZP8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.16■□□□□ 0.18
Herc1E9PZP8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Herc1E9PZP8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Herc1E9PZP8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC16.13■□□□□ 0.17
Herc1E9PZP8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Herc1E9PZP8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms