Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.75■■■□□ 2.51
Ptchd4B9EKX1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ptchd4B9EKX1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
Ptchd4B9EKX1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ptchd4B9EKX1 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.6■■■□□ 2.49
Ptchd4B9EKX1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Ptchd4B9EKX1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ptchd4B9EKX1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ptchd4B9EKX1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ptchd4B9EKX1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.43■■■□□ 2.46
Ptchd4B9EKX1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ptchd4B9EKX1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
Ptchd4B9EKX1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ptchd4B9EKX1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ptchd4B9EKX1 Gm27322-201ENSMUST00000184007 104 ntBASIC30.34■■■□□ 2.45
Ptchd4B9EKX1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ptchd4B9EKX1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ptchd4B9EKX1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Ptchd4B9EKX1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptchd4B9EKX1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.22■■■□□ 2.43
Ptchd4B9EKX1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptchd4B9EKX1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ptchd4B9EKX1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ptchd4B9EKX1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ptchd4B9EKX1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.05■■■□□ 2.4
Ptchd4B9EKX1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ptchd4B9EKX1 Gm24804-201ENSMUST00000174982 85 ntBASIC30.02■■■□□ 2.4
Ptchd4B9EKX1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ptchd4B9EKX1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30■■■□□ 2.39
Ptchd4B9EKX1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ptchd4B9EKX1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ptchd4B9EKX1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ptchd4B9EKX1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Ptchd4B9EKX1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.95■■■□□ 2.39
Ptchd4B9EKX1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptchd4B9EKX1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptchd4B9EKX1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Ptchd4B9EKX1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptchd4B9EKX1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ptchd4B9EKX1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Ptchd4B9EKX1 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.8■■■□□ 2.36
Ptchd4B9EKX1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ptchd4B9EKX1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ptchd4B9EKX1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.77■■■□□ 2.36
Ptchd4B9EKX1 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.76■■■□□ 2.35
Ptchd4B9EKX1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ptchd4B9EKX1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ptchd4B9EKX1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Ptchd4B9EKX1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ptchd4B9EKX1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ptchd4B9EKX1 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.6■■■□□ 2.33
Ptchd4B9EKX1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ptchd4B9EKX1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ptchd4B9EKX1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ptchd4B9EKX1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ptchd4B9EKX1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Ptchd4B9EKX1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
Ptchd4B9EKX1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Ptchd4B9EKX1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.48■■■□□ 2.31
Ptchd4B9EKX1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ptchd4B9EKX1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ptchd4B9EKX1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ptchd4B9EKX1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
Ptchd4B9EKX1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ptchd4B9EKX1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptchd4B9EKX1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ptchd4B9EKX1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.35■■■□□ 2.29
Ptchd4B9EKX1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ptchd4B9EKX1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ptchd4B9EKX1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ptchd4B9EKX1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ptchd4B9EKX1 Zfp131-205ENSMUST00000223812 663 ntBASIC29.28■■■□□ 2.28
Ptchd4B9EKX1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ptchd4B9EKX1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.2■■■□□ 2.27
Ptchd4B9EKX1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ptchd4B9EKX1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ptchd4B9EKX1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Ptchd4B9EKX1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptchd4B9EKX1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ptchd4B9EKX1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Ptchd4B9EKX1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ptchd4B9EKX1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
Ptchd4B9EKX1 Mipep-204ENSMUST00000225043 1548 ntBASIC29.1■■■□□ 2.25
Ptchd4B9EKX1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ptchd4B9EKX1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Ptchd4B9EKX1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Ptchd4B9EKX1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
Ptchd4B9EKX1 Peli2-204ENSMUST00000226513 1320 ntBASIC29.05■■■□□ 2.24
Ptchd4B9EKX1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ptchd4B9EKX1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ptchd4B9EKX1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ptchd4B9EKX1 Gm16148-201ENSMUST00000119653 893 ntBASIC29.03■■■□□ 2.24
Ptchd4B9EKX1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.01■■■□□ 2.23
Ptchd4B9EKX1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ptchd4B9EKX1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29■■■□□ 2.23
Ptchd4B9EKX1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Ptchd4B9EKX1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Ptchd4B9EKX1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ptchd4B9EKX1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Ptchd4B9EKX1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.96■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 270.5 ms