Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Gm27322-201ENSMUST00000184007 104 ntBASIC31.19■■■□□ 2.58
Slc6a21A0A1B0GSD2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Slc6a21A0A1B0GSD2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Slc6a21A0A1B0GSD2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slc6a21A0A1B0GSD2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.14■■■□□ 2.57
Slc6a21A0A1B0GSD2 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.1■■■□□ 2.57
Slc6a21A0A1B0GSD2 Gm24804-201ENSMUST00000174982 85 ntBASIC31.09■■■□□ 2.57
Slc6a21A0A1B0GSD2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Slc6a21A0A1B0GSD2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Slc6a21A0A1B0GSD2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Slc6a21A0A1B0GSD2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31■■■□□ 2.55
Slc6a21A0A1B0GSD2 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.99■■■□□ 2.55
Slc6a21A0A1B0GSD2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slc6a21A0A1B0GSD2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Slc6a21A0A1B0GSD2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.88■■■□□ 2.53
Slc6a21A0A1B0GSD2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Slc6a21A0A1B0GSD2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Slc6a21A0A1B0GSD2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Slc6a21A0A1B0GSD2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Slc6a21A0A1B0GSD2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Slc6a21A0A1B0GSD2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.72■■■□□ 2.51
Slc6a21A0A1B0GSD2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Slc6a21A0A1B0GSD2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Slc6a21A0A1B0GSD2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.56■■■□□ 2.48
Slc6a21A0A1B0GSD2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Slc6a21A0A1B0GSD2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Slc6a21A0A1B0GSD2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Slc6a21A0A1B0GSD2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Slc6a21A0A1B0GSD2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Slc6a21A0A1B0GSD2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Slc6a21A0A1B0GSD2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Slc6a21A0A1B0GSD2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Slc6a21A0A1B0GSD2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.47■■■□□ 2.47
Slc6a21A0A1B0GSD2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Slc6a21A0A1B0GSD2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Slc6a21A0A1B0GSD2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Slc6a21A0A1B0GSD2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Slc6a21A0A1B0GSD2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Slc6a21A0A1B0GSD2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Slc6a21A0A1B0GSD2 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.39■■■□□ 2.46
Slc6a21A0A1B0GSD2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.38■■■□□ 2.45
Slc6a21A0A1B0GSD2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Slc6a21A0A1B0GSD2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
Slc6a21A0A1B0GSD2 Zfp131-205ENSMUST00000223812 663 ntBASIC30.37■■■□□ 2.45
Slc6a21A0A1B0GSD2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Slc6a21A0A1B0GSD2 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.31■■■□□ 2.44
Slc6a21A0A1B0GSD2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Slc6a21A0A1B0GSD2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Slc6a21A0A1B0GSD2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Slc6a21A0A1B0GSD2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Slc6a21A0A1B0GSD2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Slc6a21A0A1B0GSD2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Slc6a21A0A1B0GSD2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.16■■■□□ 2.42
Slc6a21A0A1B0GSD2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Slc6a21A0A1B0GSD2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Slc6a21A0A1B0GSD2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Slc6a21A0A1B0GSD2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Slc6a21A0A1B0GSD2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.03■■■□□ 2.4
Slc6a21A0A1B0GSD2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Slc6a21A0A1B0GSD2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Slc6a21A0A1B0GSD2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Slc6a21A0A1B0GSD2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Slc6a21A0A1B0GSD2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Slc6a21A0A1B0GSD2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Slc6a21A0A1B0GSD2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Slc6a21A0A1B0GSD2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Slc6a21A0A1B0GSD2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Slc6a21A0A1B0GSD2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Slc6a21A0A1B0GSD2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Slc6a21A0A1B0GSD2 Gm16148-201ENSMUST00000119653 893 ntBASIC29.86■■■□□ 2.37
Slc6a21A0A1B0GSD2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.84■■■□□ 2.37
Slc6a21A0A1B0GSD2 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.84■■■□□ 2.37
Slc6a21A0A1B0GSD2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Slc6a21A0A1B0GSD2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Slc6a21A0A1B0GSD2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Slc6a21A0A1B0GSD2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Slc6a21A0A1B0GSD2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Slc6a21A0A1B0GSD2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Slc6a21A0A1B0GSD2 Peli2-204ENSMUST00000226513 1320 ntBASIC29.7■■■□□ 2.34
Slc6a21A0A1B0GSD2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Slc6a21A0A1B0GSD2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Slc6a21A0A1B0GSD2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Slc6a21A0A1B0GSD2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Slc6a21A0A1B0GSD2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Slc6a21A0A1B0GSD2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Slc6a21A0A1B0GSD2 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.62■■■□□ 2.33
Slc6a21A0A1B0GSD2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Slc6a21A0A1B0GSD2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Slc6a21A0A1B0GSD2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Slc6a21A0A1B0GSD2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Slc6a21A0A1B0GSD2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
Slc6a21A0A1B0GSD2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Slc6a21A0A1B0GSD2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Slc6a21A0A1B0GSD2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.55■■■□□ 2.32
Slc6a21A0A1B0GSD2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Slc6a21A0A1B0GSD2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Slc6a21A0A1B0GSD2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Slc6a21A0A1B0GSD2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.48■■■□□ 2.31
Slc6a21A0A1B0GSD2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.48■■■□□ 2.31
Slc6a21A0A1B0GSD2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.48■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms