Protein–RNA interactions for Protein: A0A140T8U4

Rpl36-ps4, Ribosomal protein L36, pseudogene 4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl36-ps4A0A140T8U4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpl36-ps4A0A140T8U4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl36-ps4A0A140T8U4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpl36-ps4A0A140T8U4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl36-ps4A0A140T8U4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl36-ps4A0A140T8U4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rpl36-ps4A0A140T8U4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl36-ps4A0A140T8U4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.49■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl36-ps4A0A140T8U4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl36-ps4A0A140T8U4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl36-ps4A0A140T8U4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl36-ps4A0A140T8U4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rpl36-ps4A0A140T8U4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.41■□□□□ 0.7
Rpl36-ps4A0A140T8U4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl36-ps4A0A140T8U4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl36-ps4A0A140T8U4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl36-ps4A0A140T8U4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl36-ps4A0A140T8U4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl36-ps4A0A140T8U4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rpl36-ps4A0A140T8U4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl36-ps4A0A140T8U4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl36-ps4A0A140T8U4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rpl36-ps4A0A140T8U4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpl36-ps4A0A140T8U4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl36-ps4A0A140T8U4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
Rpl36-ps4A0A140T8U4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.22■□□□□ 0.67
Rpl36-ps4A0A140T8U4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl36-ps4A0A140T8U4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.2■□□□□ 0.66
Rpl36-ps4A0A140T8U4 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.18■□□□□ 0.66
Rpl36-ps4A0A140T8U4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl36-ps4A0A140T8U4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl36-ps4A0A140T8U4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Rpl36-ps4A0A140T8U4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpl36-ps4A0A140T8U4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpl36-ps4A0A140T8U4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpl36-ps4A0A140T8U4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpl36-ps4A0A140T8U4 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.03■□□□□ 0.64
Rpl36-ps4A0A140T8U4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpl36-ps4A0A140T8U4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpl36-ps4A0A140T8U4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpl36-ps4A0A140T8U4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Gm27325-201ENSMUST00000175467 74 ntBASIC18.92■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl36-ps4A0A140T8U4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl36-ps4A0A140T8U4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl36-ps4A0A140T8U4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.84■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpl36-ps4A0A140T8U4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.82■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.79■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl36-ps4A0A140T8U4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.72■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rpl36-ps4A0A140T8U4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rpl36-ps4A0A140T8U4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms