Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
Cfap99A0A140LIX9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Cfap99A0A140LIX9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.11■■■□□ 2.89
Cfap99A0A140LIX9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Cfap99A0A140LIX9 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.08■■■□□ 2.89
Cfap99A0A140LIX9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.07■■■□□ 2.88
Cfap99A0A140LIX9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.04■■■□□ 2.88
Cfap99A0A140LIX9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Cfap99A0A140LIX9 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.99■■■□□ 2.87
Cfap99A0A140LIX9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
Cfap99A0A140LIX9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Cfap99A0A140LIX9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.92■■■□□ 2.86
Cfap99A0A140LIX9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.91■■■□□ 2.86
Cfap99A0A140LIX9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Cfap99A0A140LIX9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Cfap99A0A140LIX9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
Cfap99A0A140LIX9 Gm27322-201ENSMUST00000184007 104 ntBASIC32.85■■■□□ 2.85
Cfap99A0A140LIX9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Cfap99A0A140LIX9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Cfap99A0A140LIX9 Gm24804-201ENSMUST00000174982 85 ntBASIC32.72■■■□□ 2.83
Cfap99A0A140LIX9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.72■■■□□ 2.83
Cfap99A0A140LIX9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
Cfap99A0A140LIX9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Cfap99A0A140LIX9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cfap99A0A140LIX9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
Cfap99A0A140LIX9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Cfap99A0A140LIX9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Cfap99A0A140LIX9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
Cfap99A0A140LIX9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cfap99A0A140LIX9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cfap99A0A140LIX9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cfap99A0A140LIX9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Cfap99A0A140LIX9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.5■■■□□ 2.79
Cfap99A0A140LIX9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cfap99A0A140LIX9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cfap99A0A140LIX9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cfap99A0A140LIX9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cfap99A0A140LIX9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Cfap99A0A140LIX9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Cfap99A0A140LIX9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.31■■■□□ 2.76
Cfap99A0A140LIX9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Cfap99A0A140LIX9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Cfap99A0A140LIX9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Cfap99A0A140LIX9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.2■■■□□ 2.75
Cfap99A0A140LIX9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Cfap99A0A140LIX9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cfap99A0A140LIX9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Cfap99A0A140LIX9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
Cfap99A0A140LIX9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Cfap99A0A140LIX9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cfap99A0A140LIX9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cfap99A0A140LIX9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Cfap99A0A140LIX9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Cfap99A0A140LIX9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Cfap99A0A140LIX9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Cfap99A0A140LIX9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Cfap99A0A140LIX9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cfap99A0A140LIX9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cfap99A0A140LIX9 Zfp131-205ENSMUST00000223812 663 ntBASIC32.01■■■□□ 2.71
Cfap99A0A140LIX9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Cfap99A0A140LIX9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32■■■□□ 2.71
Cfap99A0A140LIX9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cfap99A0A140LIX9 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.97■■■□□ 2.71
Cfap99A0A140LIX9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cfap99A0A140LIX9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cfap99A0A140LIX9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.95■■■□□ 2.71
Cfap99A0A140LIX9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cfap99A0A140LIX9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Cfap99A0A140LIX9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Cfap99A0A140LIX9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Cfap99A0A140LIX9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cfap99A0A140LIX9 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.82■■■□□ 2.68
Cfap99A0A140LIX9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cfap99A0A140LIX9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Cfap99A0A140LIX9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Cfap99A0A140LIX9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.77■■■□□ 2.68
Cfap99A0A140LIX9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Cfap99A0A140LIX9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Cfap99A0A140LIX9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Cfap99A0A140LIX9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cfap99A0A140LIX9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.64■■■□□ 2.66
Cfap99A0A140LIX9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Cfap99A0A140LIX9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cfap99A0A140LIX9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Cfap99A0A140LIX9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Cfap99A0A140LIX9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cfap99A0A140LIX9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Cfap99A0A140LIX9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.49■■■□□ 2.63
Cfap99A0A140LIX9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cfap99A0A140LIX9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Cfap99A0A140LIX9 Gm16148-201ENSMUST00000119653 893 ntBASIC31.46■■■□□ 2.63
Cfap99A0A140LIX9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.46■■■□□ 2.63
Cfap99A0A140LIX9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cfap99A0A140LIX9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Cfap99A0A140LIX9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cfap99A0A140LIX9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cfap99A0A140LIX9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cfap99A0A140LIX9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cfap99A0A140LIX9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cfap99A0A140LIX9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms