Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm27322-201ENSMUST00000184007 104 ntBASIC61.98■■■■■ 7.51
Gm35339A0A140LHH9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC61.89■■■■■ 7.5
Gm35339A0A140LHH9 Zfp131-205ENSMUST00000223812 663 ntBASIC61.76■■■■■ 7.48
Gm35339A0A140LHH9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC61.76■■■■■ 7.48
Gm35339A0A140LHH9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC61.73■■■■■ 7.47
Gm35339A0A140LHH9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC61.72■■■■■ 7.47
Gm35339A0A140LHH9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC61.68■■■■■ 7.46
Gm35339A0A140LHH9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC61.64■■■■■ 7.46
Gm35339A0A140LHH9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC61.63■■■■■ 7.46
Gm35339A0A140LHH9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC61.63■■■■■ 7.46
Gm35339A0A140LHH9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC61.61■■■■■ 7.45
Gm35339A0A140LHH9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC61.6■■■■■ 7.45
Gm35339A0A140LHH9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC61.5■■■■■ 7.44
Gm35339A0A140LHH9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC61.38■■■■■ 7.42
Gm35339A0A140LHH9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC61.38■■■■■ 7.42
Gm35339A0A140LHH9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC61.3■■■■■ 7.4
Gm35339A0A140LHH9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC61.21■■■■■ 7.39
Gm35339A0A140LHH9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC61.19■■■■■ 7.39
Gm35339A0A140LHH9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC61.08■■■■■ 7.37
Gm35339A0A140LHH9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC61.04■■■■■ 7.36
Gm35339A0A140LHH9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC61■■■■■ 7.35
Gm35339A0A140LHH9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC60.93■■■■■ 7.34
Gm35339A0A140LHH9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC60.9■■■■■ 7.34
Gm35339A0A140LHH9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC60.83■■■■■ 7.33
Gm35339A0A140LHH9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC60.83■■■■■ 7.33
Gm35339A0A140LHH9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC60.82■■■■■ 7.33
Gm35339A0A140LHH9 AC166822.3-201ENSMUST00000227394 661 ntBASIC60.8■■■■■ 7.32
Gm35339A0A140LHH9 Gm42596-201ENSMUST00000196305 1958 ntBASIC60.8■■■■■ 7.32
Gm35339A0A140LHH9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC60.78■■■■■ 7.32
Gm35339A0A140LHH9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC60.77■■■■■ 7.32
Gm35339A0A140LHH9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC60.76■■■■■ 7.32
Gm35339A0A140LHH9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC60.76■■■■■ 7.32
Gm35339A0A140LHH9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC60.7■■■■■ 7.31
Gm35339A0A140LHH9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC60.65■■■■■ 7.3
Gm35339A0A140LHH9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC60.62■■■■■ 7.29
Gm35339A0A140LHH9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC60.6■■■■■ 7.29
Gm35339A0A140LHH9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC60.59■■■■■ 7.29
Gm35339A0A140LHH9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC60.51■■■■■ 7.28
Gm35339A0A140LHH9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC60.51■■■■■ 7.28
Gm35339A0A140LHH9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC60.51■■■■■ 7.28
Gm35339A0A140LHH9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC60.45■■■■■ 7.27
Gm35339A0A140LHH9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC60.41■■■■■ 7.26
Gm35339A0A140LHH9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC60.4■■■■■ 7.26
Gm35339A0A140LHH9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC60.32■■■■■ 7.25
Gm35339A0A140LHH9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC60.29■■■■■ 7.24
Gm35339A0A140LHH9 AL845457.1-201ENSMUST00000197244 68 ntBASIC60.28■■■■■ 7.24
Gm35339A0A140LHH9 Gm10524-201ENSMUST00000181931 1893 ntBASIC60.25■■■■■ 7.24
Gm35339A0A140LHH9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC60.25■■■■■ 7.24
Gm35339A0A140LHH9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC60.21■■■■■ 7.23
Gm35339A0A140LHH9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC60.18■■■■■ 7.22
Gm35339A0A140LHH9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC60.11■■■■■ 7.21
Gm35339A0A140LHH9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC60.1■■■■■ 7.21
Gm35339A0A140LHH9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC60.09■■■■■ 7.21
Gm35339A0A140LHH9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC60.01■■■■■ 7.2
Gm35339A0A140LHH9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC60■■■■■ 7.2
Gm35339A0A140LHH9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC59.96■■■■■ 7.19
Gm35339A0A140LHH9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC59.94■■■■■ 7.19
Gm35339A0A140LHH9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC59.94■■■■■ 7.19
Gm35339A0A140LHH9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC59.92■■■■■ 7.18
Gm35339A0A140LHH9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC59.85■■■■■ 7.17
Gm35339A0A140LHH9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC59.81■■■■■ 7.17
Gm35339A0A140LHH9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC59.81■■■■■ 7.17
Gm35339A0A140LHH9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC59.72■■■■■ 7.15
Gm35339A0A140LHH9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC59.71■■■■■ 7.15
Gm35339A0A140LHH9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC59.7■■■■■ 7.15
Gm35339A0A140LHH9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC59.64■■■■■ 7.14
Gm35339A0A140LHH9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC59.6■■■■■ 7.13
Gm35339A0A140LHH9 Gm16148-201ENSMUST00000119653 893 ntBASIC59.58■■■■■ 7.13
Gm35339A0A140LHH9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC59.56■■■■■ 7.13
Gm35339A0A140LHH9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC59.55■■■■■ 7.12
Gm35339A0A140LHH9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC59.54■■■■■ 7.12
Gm35339A0A140LHH9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC59.48■■■■■ 7.11
Gm35339A0A140LHH9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC59.43■■■■■ 7.11
Gm35339A0A140LHH9 Tdp2-203ENSMUST00000223804 1136 ntBASIC59.36■■■■■ 7.09
Gm35339A0A140LHH9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC59.35■■■■■ 7.09
Gm35339A0A140LHH9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC59.34■■■■■ 7.09
Gm35339A0A140LHH9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC59.28■■■■■ 7.08
Gm35339A0A140LHH9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC59.25■■■■■ 7.07
Gm35339A0A140LHH9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC59.19■■■■■ 7.07
Gm35339A0A140LHH9 Peli2-204ENSMUST00000226513 1320 ntBASIC59.17■■■■■ 7.06
Gm35339A0A140LHH9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC59.16■■■■■ 7.06
Gm35339A0A140LHH9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC59.16■■■■■ 7.06
Gm35339A0A140LHH9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC59.14■■■■■ 7.06
Gm35339A0A140LHH9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC59.14■■■■■ 7.06
Gm35339A0A140LHH9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC59.13■■■■■ 7.06
Gm35339A0A140LHH9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC59.07■■■■■ 7.05
Gm35339A0A140LHH9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC59.05■■■■■ 7.04
Gm35339A0A140LHH9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC59.03■■■■■ 7.04
Gm35339A0A140LHH9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC59.02■■■■■ 7.04
Gm35339A0A140LHH9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC59.02■■■■■ 7.04
Gm35339A0A140LHH9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC58.98■■■■■ 7.03
Gm35339A0A140LHH9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC58.95■■■■■ 7.03
Gm35339A0A140LHH9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC58.93■■■■■ 7.02
Gm35339A0A140LHH9 Zfp131-207ENSMUST00000224946 1783 ntBASIC58.92■■■■■ 7.02
Gm35339A0A140LHH9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC58.92■■■■■ 7.02
Gm35339A0A140LHH9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC58.91■■■■■ 7.02
Gm35339A0A140LHH9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC58.84■■■■■ 7.01
Gm35339A0A140LHH9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC58.83■■■■■ 7.01
Gm35339A0A140LHH9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC58.77■■■■■ 7
Gm35339A0A140LHH9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC58.75■■■■■ 7
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms