Protein–RNA interactions for Protein: A0A0R3P9D1

Gm42688, Predicted gene 42688, mousemouse

Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42688A0A0R3P9D1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Gm42688A0A0R3P9D1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC33.04■■■□□ 2.88
Gm42688A0A0R3P9D1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Gm42688A0A0R3P9D1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Gm42688A0A0R3P9D1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.95■■■□□ 2.87
Gm42688A0A0R3P9D1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Gm42688A0A0R3P9D1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Gm42688A0A0R3P9D1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Gm42688A0A0R3P9D1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.91■■■□□ 2.86
Gm42688A0A0R3P9D1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Gm42688A0A0R3P9D1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.79■■■□□ 2.84
Gm42688A0A0R3P9D1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Gm42688A0A0R3P9D1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Gm42688A0A0R3P9D1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Gm42688A0A0R3P9D1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.65■■■□□ 2.82
Gm42688A0A0R3P9D1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Gm42688A0A0R3P9D1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Gm42688A0A0R3P9D1 Psd-208ENSMUST00000224556 2034 ntBASIC32.59■■■□□ 2.81
Gm42688A0A0R3P9D1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Gm42688A0A0R3P9D1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Gm42688A0A0R3P9D1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Gm42688A0A0R3P9D1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.49■■■□□ 2.79
Gm42688A0A0R3P9D1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Gm42688A0A0R3P9D1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Gm42688A0A0R3P9D1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Gm42688A0A0R3P9D1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Gm42688A0A0R3P9D1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Gm42688A0A0R3P9D1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
Gm42688A0A0R3P9D1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.3■■■□□ 2.76
Gm42688A0A0R3P9D1 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.3■■■□□ 2.76
Gm42688A0A0R3P9D1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Gm42688A0A0R3P9D1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Gm42688A0A0R3P9D1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Gm42688A0A0R3P9D1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.22■■■□□ 2.75
Gm42688A0A0R3P9D1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Gm42688A0A0R3P9D1 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.19■■■□□ 2.74
Gm42688A0A0R3P9D1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Gm42688A0A0R3P9D1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Gm42688A0A0R3P9D1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Gm42688A0A0R3P9D1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Gm42688A0A0R3P9D1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Gm42688A0A0R3P9D1 Gm16148-201ENSMUST00000119653 893 ntBASIC32.08■■■□□ 2.73
Gm42688A0A0R3P9D1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Gm42688A0A0R3P9D1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Gm42688A0A0R3P9D1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Gm42688A0A0R3P9D1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Gm42688A0A0R3P9D1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Gm42688A0A0R3P9D1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Gm42688A0A0R3P9D1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Gm42688A0A0R3P9D1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Gm42688A0A0R3P9D1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Gm42688A0A0R3P9D1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Gm42688A0A0R3P9D1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.92■■■□□ 2.7
Gm42688A0A0R3P9D1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Gm42688A0A0R3P9D1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Gm42688A0A0R3P9D1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
Gm42688A0A0R3P9D1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Gm42688A0A0R3P9D1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.83■■■□□ 2.69
Gm42688A0A0R3P9D1 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.83■■■□□ 2.69
Gm42688A0A0R3P9D1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Gm42688A0A0R3P9D1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Gm42688A0A0R3P9D1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Gm42688A0A0R3P9D1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Gm42688A0A0R3P9D1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.73■■■□□ 2.67
Gm42688A0A0R3P9D1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.73■■■□□ 2.67
Gm42688A0A0R3P9D1 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.71■■■□□ 2.67
Gm42688A0A0R3P9D1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gm42688A0A0R3P9D1 Gm45855-201ENSMUST00000212546 880 ntBASIC31.7■■■□□ 2.67
Gm42688A0A0R3P9D1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gm42688A0A0R3P9D1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Gm42688A0A0R3P9D1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Gm42688A0A0R3P9D1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Gm42688A0A0R3P9D1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Gm42688A0A0R3P9D1 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.59■■■□□ 2.65
Gm42688A0A0R3P9D1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Gm42688A0A0R3P9D1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Gm42688A0A0R3P9D1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Gm42688A0A0R3P9D1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Gm42688A0A0R3P9D1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.53■■■□□ 2.64
Gm42688A0A0R3P9D1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Gm42688A0A0R3P9D1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.51■■■□□ 2.63
Gm42688A0A0R3P9D1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.51■■■□□ 2.63
Gm42688A0A0R3P9D1 Peli2-204ENSMUST00000226513 1320 ntBASIC31.5■■■□□ 2.63
Gm42688A0A0R3P9D1 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.49■■■□□ 2.63
Gm42688A0A0R3P9D1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Gm42688A0A0R3P9D1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gm42688A0A0R3P9D1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.48■■■□□ 2.63
Gm42688A0A0R3P9D1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Gm42688A0A0R3P9D1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Gm42688A0A0R3P9D1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Gm42688A0A0R3P9D1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Gm42688A0A0R3P9D1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Gm42688A0A0R3P9D1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Gm42688A0A0R3P9D1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.37■■■□□ 2.61
Gm42688A0A0R3P9D1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Gm42688A0A0R3P9D1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Gm42688A0A0R3P9D1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Gm42688A0A0R3P9D1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Gm42688A0A0R3P9D1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Gm42688A0A0R3P9D1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms