Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-53A0A0G2JFC6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv4-53A0A0G2JFC6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.23■□□□□ 0.67
Igkv4-53A0A0G2JFC6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Igkv4-53A0A0G2JFC6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
Igkv4-53A0A0G2JFC6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-53A0A0G2JFC6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-53A0A0G2JFC6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-53A0A0G2JFC6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv4-53A0A0G2JFC6 Rab21-202ENSMUST00000218831 843 ntBASIC19.11■□□□□ 0.65
Igkv4-53A0A0G2JFC6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.09■□□□□ 0.65
Igkv4-53A0A0G2JFC6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv4-53A0A0G2JFC6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv4-53A0A0G2JFC6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv4-53A0A0G2JFC6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv4-53A0A0G2JFC6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.03■□□□□ 0.64
Igkv4-53A0A0G2JFC6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Igkv4-53A0A0G2JFC6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Igkv4-53A0A0G2JFC6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19■□□□□ 0.63
Igkv4-53A0A0G2JFC6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv4-53A0A0G2JFC6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.98■□□□□ 0.63
Igkv4-53A0A0G2JFC6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv4-53A0A0G2JFC6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Igkv4-53A0A0G2JFC6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv4-53A0A0G2JFC6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.87■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.85■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.84■□□□□ 0.61
Igkv4-53A0A0G2JFC6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.84■□□□□ 0.61
Igkv4-53A0A0G2JFC6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-53A0A0G2JFC6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.76■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-53A0A0G2JFC6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Gm25262-201ENSMUST00000174934 133 ntBASIC18.75■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv4-53A0A0G2JFC6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igkv4-53A0A0G2JFC6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv4-53A0A0G2JFC6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv4-53A0A0G2JFC6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv4-53A0A0G2JFC6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv4-53A0A0G2JFC6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Igkv4-53A0A0G2JFC6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-53A0A0G2JFC6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-53A0A0G2JFC6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-53A0A0G2JFC6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv4-53A0A0G2JFC6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.59■□□□□ 0.57
Igkv4-53A0A0G2JFC6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv4-53A0A0G2JFC6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv4-53A0A0G2JFC6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Igkv4-53A0A0G2JFC6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv4-53A0A0G2JFC6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv4-53A0A0G2JFC6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-53A0A0G2JFC6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-53A0A0G2JFC6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.46■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Igkv4-53A0A0G2JFC6 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.43■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.41■□□□□ 0.54
Igkv4-53A0A0G2JFC6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Igkv4-53A0A0G2JFC6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.39■□□□□ 0.53
Igkv4-53A0A0G2JFC6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv4-53A0A0G2JFC6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Igkv4-53A0A0G2JFC6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Igkv4-53A0A0G2JFC6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-53A0A0G2JFC6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-53A0A0G2JFC6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-53A0A0G2JFC6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv4-53A0A0G2JFC6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.32■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.29■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-53A0A0G2JFC6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.27■□□□□ 0.51
Igkv4-53A0A0G2JFC6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Mipep-204ENSMUST00000225043 1548 ntBASIC18.26■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms