Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav9n-2A0A0G2JDP3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.96■□□□□ 0.79
Trav9n-2A0A0G2JDP3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav9n-2A0A0G2JDP3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav9n-2A0A0G2JDP3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav9n-2A0A0G2JDP3 Rab21-202ENSMUST00000218831 843 ntBASIC19.88■□□□□ 0.77
Trav9n-2A0A0G2JDP3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav9n-2A0A0G2JDP3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav9n-2A0A0G2JDP3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav9n-2A0A0G2JDP3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav9n-2A0A0G2JDP3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav9n-2A0A0G2JDP3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav9n-2A0A0G2JDP3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav9n-2A0A0G2JDP3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav9n-2A0A0G2JDP3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trav9n-2A0A0G2JDP3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav9n-2A0A0G2JDP3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav9n-2A0A0G2JDP3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav9n-2A0A0G2JDP3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav9n-2A0A0G2JDP3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trav9n-2A0A0G2JDP3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.62■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.6■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav9n-2A0A0G2JDP3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.58■□□□□ 0.73
Trav9n-2A0A0G2JDP3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Gm25262-201ENSMUST00000174934 133 ntBASIC19.54■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav9n-2A0A0G2JDP3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav9n-2A0A0G2JDP3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.49■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav9n-2A0A0G2JDP3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav9n-2A0A0G2JDP3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9n-2A0A0G2JDP3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav9n-2A0A0G2JDP3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav9n-2A0A0G2JDP3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav9n-2A0A0G2JDP3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav9n-2A0A0G2JDP3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav9n-2A0A0G2JDP3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav9n-2A0A0G2JDP3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav9n-2A0A0G2JDP3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9n-2A0A0G2JDP3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav9n-2A0A0G2JDP3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav9n-2A0A0G2JDP3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav9n-2A0A0G2JDP3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trav9n-2A0A0G2JDP3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav9n-2A0A0G2JDP3 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.17■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.16■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav9n-2A0A0G2JDP3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trav9n-2A0A0G2JDP3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.12■□□□□ 0.65
Trav9n-2A0A0G2JDP3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.1■□□□□ 0.65
Trav9n-2A0A0G2JDP3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav9n-2A0A0G2JDP3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav9n-2A0A0G2JDP3 Mipep-204ENSMUST00000225043 1548 ntBASIC19■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Gm17082-201ENSMUST00000166043 1091 ntBASIC19■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.98■□□□□ 0.63
Trav9n-2A0A0G2JDP3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Gm27322-201ENSMUST00000184007 104 ntBASIC18.98■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9n-2A0A0G2JDP3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav9n-2A0A0G2JDP3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9n-2A0A0G2JDP3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9n-2A0A0G2JDP3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav9n-2A0A0G2JDP3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms