Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V4A0A0B4J1J8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V4A0A0B4J1J8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tcrg-V4A0A0B4J1J8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tcrg-V4A0A0B4J1J8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tcrg-V4A0A0B4J1J8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tcrg-V4A0A0B4J1J8 Gm15045-201ENSMUST00000117359 883 ntBASIC20.31■□□□□ 0.84
Tcrg-V4A0A0B4J1J8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tcrg-V4A0A0B4J1J8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.21■□□□□ 0.83
Tcrg-V4A0A0B4J1J8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V4A0A0B4J1J8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V4A0A0B4J1J8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tcrg-V4A0A0B4J1J8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tcrg-V4A0A0B4J1J8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Tcrg-V4A0A0B4J1J8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tcrg-V4A0A0B4J1J8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tcrg-V4A0A0B4J1J8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tcrg-V4A0A0B4J1J8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tcrg-V4A0A0B4J1J8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tcrg-V4A0A0B4J1J8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tcrg-V4A0A0B4J1J8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcrg-V4A0A0B4J1J8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.01■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.99■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcrg-V4A0A0B4J1J8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tcrg-V4A0A0B4J1J8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tcrg-V4A0A0B4J1J8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tcrg-V4A0A0B4J1J8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tcrg-V4A0A0B4J1J8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tcrg-V4A0A0B4J1J8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.84■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tcrg-V4A0A0B4J1J8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.82■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.81■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Tcrg-V4A0A0B4J1J8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tcrg-V4A0A0B4J1J8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tcrg-V4A0A0B4J1J8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcrg-V4A0A0B4J1J8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcrg-V4A0A0B4J1J8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcrg-V4A0A0B4J1J8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.6■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tcrg-V4A0A0B4J1J8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tcrg-V4A0A0B4J1J8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tcrg-V4A0A0B4J1J8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tcrg-V4A0A0B4J1J8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcrg-V4A0A0B4J1J8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tcrg-V4A0A0B4J1J8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tcrg-V4A0A0B4J1J8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.48■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tcrg-V4A0A0B4J1J8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms