Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23,35■■□□□ 1,33
Igkv4-50A0A0B4J1J0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Igkv4-50A0A0B4J1J0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Igkv4-50A0A0B4J1J0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Igkv4-50A0A0B4J1J0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23,28■■□□□ 1,32
Igkv4-50A0A0B4J1J0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,28■■□□□ 1,32
Igkv4-50A0A0B4J1J0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23,23■■□□□ 1,31
Igkv4-50A0A0B4J1J0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Igkv4-50A0A0B4J1J0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Igkv4-50A0A0B4J1J0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Igkv4-50A0A0B4J1J0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,16■■□□□ 1,3
Igkv4-50A0A0B4J1J0 Rab21-202ENSMUST00000218831 843 ntBASIC23,15■■□□□ 1,3
Igkv4-50A0A0B4J1J0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23,08■■□□□ 1,28
Igkv4-50A0A0B4J1J0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23,06■■□□□ 1,28
Igkv4-50A0A0B4J1J0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23,04■■□□□ 1,28
Igkv4-50A0A0B4J1J0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23,01■■□□□ 1,27
Igkv4-50A0A0B4J1J0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23,01■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23,01■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,99■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,98■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,96■■□□□ 1,27
Igkv4-50A0A0B4J1J0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22,94■■□□□ 1,26
Igkv4-50A0A0B4J1J0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22,93■■□□□ 1,26
Igkv4-50A0A0B4J1J0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22,9■■□□□ 1,26
Igkv4-50A0A0B4J1J0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,9■■□□□ 1,26
Igkv4-50A0A0B4J1J0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,88■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22,88■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Zfp131-207ENSMUST00000224946 1783 ntBASIC22,88■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,87■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22,86■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22,86■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22,85■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Igkv4-50A0A0B4J1J0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22,82■■□□□ 1,24
Igkv4-50A0A0B4J1J0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22,82■■□□□ 1,24
Igkv4-50A0A0B4J1J0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22,81■■□□□ 1,24
Igkv4-50A0A0B4J1J0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,81■■□□□ 1,24
Igkv4-50A0A0B4J1J0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22,79■■□□□ 1,24
Igkv4-50A0A0B4J1J0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Igkv4-50A0A0B4J1J0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22,75■■□□□ 1,23
Igkv4-50A0A0B4J1J0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,73■■□□□ 1,23
Igkv4-50A0A0B4J1J0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Igkv4-50A0A0B4J1J0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22,69■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22,69■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22,68■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22,68■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,67■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22,66■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Igkv4-50A0A0B4J1J0 Gm25262-201ENSMUST00000174934 133 ntBASIC22,62■■□□□ 1,21
Igkv4-50A0A0B4J1J0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22,59■■□□□ 1,21
Igkv4-50A0A0B4J1J0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Igkv4-50A0A0B4J1J0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22,56■■□□□ 1,2
Igkv4-50A0A0B4J1J0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22,51■■□□□ 1,19
Igkv4-50A0A0B4J1J0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Igkv4-50A0A0B4J1J0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22,48■■□□□ 1,19
Igkv4-50A0A0B4J1J0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Igkv4-50A0A0B4J1J0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22,46■■□□□ 1,19
Igkv4-50A0A0B4J1J0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22,44■■□□□ 1,18
Igkv4-50A0A0B4J1J0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Igkv4-50A0A0B4J1J0 AL845457.1-201ENSMUST00000197244 68 ntBASIC22,4■■□□□ 1,18
Igkv4-50A0A0B4J1J0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Igkv4-50A0A0B4J1J0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22,39■■□□□ 1,17
Igkv4-50A0A0B4J1J0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22,38■■□□□ 1,17
Igkv4-50A0A0B4J1J0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22,37■■□□□ 1,17
Igkv4-50A0A0B4J1J0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22,37■■□□□ 1,17
Igkv4-50A0A0B4J1J0 Gm2415-204ENSMUST00000190235 2004 ntBASIC22,36■■□□□ 1,17
Igkv4-50A0A0B4J1J0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22,33■■□□□ 1,17
Igkv4-50A0A0B4J1J0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22,33■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22,29■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22,29■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22,28■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22,27■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,27■■□□□ 1,16
Igkv4-50A0A0B4J1J0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,26■■□□□ 1,15
Igkv4-50A0A0B4J1J0 Mipep-204ENSMUST00000225043 1548 ntBASIC22,26■■□□□ 1,15
Igkv4-50A0A0B4J1J0 Gm6658-202ENSMUST00000209493 1885 ntBASIC22,22■■□□□ 1,15
Igkv4-50A0A0B4J1J0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22,21■■□□□ 1,15
Igkv4-50A0A0B4J1J0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22,21■■□□□ 1,15
Igkv4-50A0A0B4J1J0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22,2■■□□□ 1,14
Igkv4-50A0A0B4J1J0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Igkv4-50A0A0B4J1J0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22,19■■□□□ 1,14
Igkv4-50A0A0B4J1J0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22,18■■□□□ 1,14
Igkv4-50A0A0B4J1J0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Igkv4-50A0A0B4J1J0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Igkv4-50A0A0B4J1J0 Gm17082-201ENSMUST00000166043 1091 ntBASIC22,13■■□□□ 1,13
Igkv4-50A0A0B4J1J0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22,13■■□□□ 1,13
Igkv4-50A0A0B4J1J0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22,11■■□□□ 1,13
Igkv4-50A0A0B4J1J0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22,11■■□□□ 1,13
Igkv4-50A0A0B4J1J0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22,11■■□□□ 1,13
Igkv4-50A0A0B4J1J0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22,09■■□□□ 1,13
Igkv4-50A0A0B4J1J0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22,09■■□□□ 1,13
Igkv4-50A0A0B4J1J0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Retrieved 100 of 76,532 protein–RNA pairs in 12,2 ms