Protein–RNA interactions for Protein: A0A0B4J1I4

Igkv4-72, Immunoglobulin kappa chain variable 4-72 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-72A0A0B4J1I4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv4-72A0A0B4J1I4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv4-72A0A0B4J1I4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.57■□□□□ 0.72
Igkv4-72A0A0B4J1I4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv4-72A0A0B4J1I4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.52■□□□□ 0.72
Igkv4-72A0A0B4J1I4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Igkv4-72A0A0B4J1I4 Gm25262-201ENSMUST00000174934 133 ntBASIC19.44■□□□□ 0.7
Igkv4-72A0A0B4J1I4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv4-72A0A0B4J1I4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-72A0A0B4J1I4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-72A0A0B4J1I4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv4-72A0A0B4J1I4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.39■□□□□ 0.69
Igkv4-72A0A0B4J1I4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.38■□□□□ 0.69
Igkv4-72A0A0B4J1I4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.36■□□□□ 0.69
Igkv4-72A0A0B4J1I4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-72A0A0B4J1I4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv4-72A0A0B4J1I4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv4-72A0A0B4J1I4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Igkv4-72A0A0B4J1I4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-72A0A0B4J1I4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv4-72A0A0B4J1I4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv4-72A0A0B4J1I4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-72A0A0B4J1I4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv4-72A0A0B4J1I4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv4-72A0A0B4J1I4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv4-72A0A0B4J1I4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.13■□□□□ 0.65
Igkv4-72A0A0B4J1I4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv4-72A0A0B4J1I4 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.1■□□□□ 0.65
Igkv4-72A0A0B4J1I4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igkv4-72A0A0B4J1I4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.08■□□□□ 0.64
Igkv4-72A0A0B4J1I4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.04■□□□□ 0.64
Igkv4-72A0A0B4J1I4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Igkv4-72A0A0B4J1I4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.01■□□□□ 0.63
Igkv4-72A0A0B4J1I4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv4-72A0A0B4J1I4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.98■□□□□ 0.63
Igkv4-72A0A0B4J1I4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv4-72A0A0B4J1I4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv4-72A0A0B4J1I4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Igkv4-72A0A0B4J1I4 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.88■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.86■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv4-72A0A0B4J1I4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Gm26115-201ENSMUST00000175605 87 ntBASIC18.82■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Gm27322-201ENSMUST00000184007 104 ntBASIC18.8■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.77■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv4-72A0A0B4J1I4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Gm8109-201ENSMUST00000194076 746 ntBASIC18.75■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.72■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.72■□□□□ 0.59
Igkv4-72A0A0B4J1I4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Igkv4-72A0A0B4J1I4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv4-72A0A0B4J1I4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv4-72A0A0B4J1I4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Igkv4-72A0A0B4J1I4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv4-72A0A0B4J1I4 Mipep-204ENSMUST00000225043 1548 ntBASIC18.65■□□□□ 0.58
Igkv4-72A0A0B4J1I4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Igkv4-72A0A0B4J1I4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.64■□□□□ 0.57
Igkv4-72A0A0B4J1I4 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.64■□□□□ 0.57
Igkv4-72A0A0B4J1I4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-72A0A0B4J1I4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv4-72A0A0B4J1I4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv4-72A0A0B4J1I4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms