Protein–RNA interactions for Protein: A0A0A6YWX0

Ighv1-19, Immunoglobulin heavy variable V1-19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-19A0A0A6YWX0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv1-19A0A0A6YWX0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.85■■□□□ 1.09
Ighv1-19A0A0A6YWX0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv1-19A0A0A6YWX0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv1-19A0A0A6YWX0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv1-19A0A0A6YWX0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv1-19A0A0A6YWX0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ighv1-19A0A0A6YWX0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-19A0A0A6YWX0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-19A0A0A6YWX0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-19A0A0A6YWX0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.67■■□□□ 1.06
Ighv1-19A0A0A6YWX0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Ighv1-19A0A0A6YWX0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-19A0A0A6YWX0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv1-19A0A0A6YWX0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-19A0A0A6YWX0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.65■■□□□ 1.06
Ighv1-19A0A0A6YWX0 Gm25238-201ENSMUST00000174914 89 ntBASIC21.62■■□□□ 1.05
Ighv1-19A0A0A6YWX0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.62■■□□□ 1.05
Ighv1-19A0A0A6YWX0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-19A0A0A6YWX0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.59■■□□□ 1.05
Ighv1-19A0A0A6YWX0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ighv1-19A0A0A6YWX0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ighv1-19A0A0A6YWX0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ighv1-19A0A0A6YWX0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv1-19A0A0A6YWX0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ighv1-19A0A0A6YWX0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-19A0A0A6YWX0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-19A0A0A6YWX0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv1-19A0A0A6YWX0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-19A0A0A6YWX0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-19A0A0A6YWX0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-19A0A0A6YWX0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.42■■□□□ 1.02
Ighv1-19A0A0A6YWX0 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.4■■□□□ 1.02
Ighv1-19A0A0A6YWX0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-19A0A0A6YWX0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv1-19A0A0A6YWX0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Ighv1-19A0A0A6YWX0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.3■■□□□ 1
Ighv1-19A0A0A6YWX0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-19A0A0A6YWX0 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.28■■□□□ 1
Ighv1-19A0A0A6YWX0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-19A0A0A6YWX0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-19A0A0A6YWX0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-19A0A0A6YWX0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-19A0A0A6YWX0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-19A0A0A6YWX0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-19A0A0A6YWX0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-19A0A0A6YWX0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.22■□□□□ 0.99
Ighv1-19A0A0A6YWX0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.18■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.17■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.15■□□□□ 0.98
Ighv1-19A0A0A6YWX0 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.13■□□□□ 0.97
Ighv1-19A0A0A6YWX0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-19A0A0A6YWX0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-19A0A0A6YWX0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-19A0A0A6YWX0 Rab21-202ENSMUST00000218831 843 ntBASIC21.08■□□□□ 0.97
Ighv1-19A0A0A6YWX0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.08■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.06■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-19A0A0A6YWX0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.99■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-19A0A0A6YWX0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.91■□□□□ 0.94
Ighv1-19A0A0A6YWX0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-19A0A0A6YWX0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.89■□□□□ 0.93
Ighv1-19A0A0A6YWX0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ighv1-19A0A0A6YWX0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-19A0A0A6YWX0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-19A0A0A6YWX0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Ighv1-19A0A0A6YWX0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-19A0A0A6YWX0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.79■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-19A0A0A6YWX0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms