Protein–RNA interactions for Protein: A0A087WQ54

Gm28285, Predicted gene 28285 (Fragment), mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28285A0A087WQ54 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm28285A0A087WQ54 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.45■■□□□ 1.18
Gm28285A0A087WQ54 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm28285A0A087WQ54 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Gm28285A0A087WQ54 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.42■■□□□ 1.18
Gm28285A0A087WQ54 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm28285A0A087WQ54 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Gm28285A0A087WQ54 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm28285A0A087WQ54 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm28285A0A087WQ54 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm28285A0A087WQ54 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm28285A0A087WQ54 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Gm28285A0A087WQ54 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm28285A0A087WQ54 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm28285A0A087WQ54 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm28285A0A087WQ54 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm28285A0A087WQ54 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Gm28285A0A087WQ54 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Gm28285A0A087WQ54 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm28285A0A087WQ54 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.13■■□□□ 1.13
Gm28285A0A087WQ54 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm28285A0A087WQ54 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.08■■□□□ 1.13
Gm28285A0A087WQ54 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Gm28285A0A087WQ54 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.06■■□□□ 1.12
Gm28285A0A087WQ54 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.06■■□□□ 1.12
Gm28285A0A087WQ54 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28285A0A087WQ54 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm28285A0A087WQ54 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28285A0A087WQ54 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28285A0A087WQ54 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28285A0A087WQ54 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28285A0A087WQ54 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm28285A0A087WQ54 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Gm28285A0A087WQ54 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm28285A0A087WQ54 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.87■■□□□ 1.09
Gm28285A0A087WQ54 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm28285A0A087WQ54 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28285A0A087WQ54 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28285A0A087WQ54 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28285A0A087WQ54 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm28285A0A087WQ54 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28285A0A087WQ54 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28285A0A087WQ54 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm28285A0A087WQ54 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm28285A0A087WQ54 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28285A0A087WQ54 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28285A0A087WQ54 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.73■■□□□ 1.07
Gm28285A0A087WQ54 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28285A0A087WQ54 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28285A0A087WQ54 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28285A0A087WQ54 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28285A0A087WQ54 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28285A0A087WQ54 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28285A0A087WQ54 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.66■■□□□ 1.06
Gm28285A0A087WQ54 Gm27325-201ENSMUST00000175467 74 ntBASIC21.65■■□□□ 1.06
Gm28285A0A087WQ54 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28285A0A087WQ54 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28285A0A087WQ54 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28285A0A087WQ54 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.61■■□□□ 1.05
Gm28285A0A087WQ54 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28285A0A087WQ54 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28285A0A087WQ54 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gm28285A0A087WQ54 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gm28285A0A087WQ54 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Gm28285A0A087WQ54 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm28285A0A087WQ54 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gm28285A0A087WQ54 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm28285A0A087WQ54 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28285A0A087WQ54 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm28285A0A087WQ54 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28285A0A087WQ54 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28285A0A087WQ54 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28285A0A087WQ54 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm28285A0A087WQ54 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm28285A0A087WQ54 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm28285A0A087WQ54 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm28285A0A087WQ54 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.46■■□□□ 1.03
Gm28285A0A087WQ54 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.44■■□□□ 1.02
Gm28285A0A087WQ54 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.44■■□□□ 1.02
Gm28285A0A087WQ54 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gm28285A0A087WQ54 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28285A0A087WQ54 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28285A0A087WQ54 Zxda-201ENSMUST00000117281 2621 ntBASIC21.42■■□□□ 1.02
Gm28285A0A087WQ54 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm28285A0A087WQ54 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm28285A0A087WQ54 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm28285A0A087WQ54 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm28285A0A087WQ54 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Gm28285A0A087WQ54 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Gm28285A0A087WQ54 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.37■■□□□ 1.01
Gm28285A0A087WQ54 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.36■■□□□ 1.01
Gm28285A0A087WQ54 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28285A0A087WQ54 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28285A0A087WQ54 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28285A0A087WQ54 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm28285A0A087WQ54 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28285A0A087WQ54 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28285A0A087WQ54 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28285A0A087WQ54 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28285A0A087WQ54 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms