Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,37■■□□□ 1,17
Trav15-2-dv6-2A0A075B650 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22,35■■□□□ 1,17
Trav15-2-dv6-2A0A075B650 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Trav15-2-dv6-2A0A075B650 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22,33■■□□□ 1,16
Trav15-2-dv6-2A0A075B650 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Trav15-2-dv6-2A0A075B650 Gm27325-201ENSMUST00000175467 74 ntBASIC22,28■■□□□ 1,16
Trav15-2-dv6-2A0A075B650 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22,27■■□□□ 1,16
Trav15-2-dv6-2A0A075B650 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Trav15-2-dv6-2A0A075B650 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Trav15-2-dv6-2A0A075B650 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22,19■■□□□ 1,14
Trav15-2-dv6-2A0A075B650 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,19■■□□□ 1,14
Trav15-2-dv6-2A0A075B650 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,13■■□□□ 1,13
Trav15-2-dv6-2A0A075B650 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22,13■■□□□ 1,13
Trav15-2-dv6-2A0A075B650 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Trav15-2-dv6-2A0A075B650 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,11■■□□□ 1,13
Trav15-2-dv6-2A0A075B650 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,07■■□□□ 1,12
Trav15-2-dv6-2A0A075B650 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Trav15-2-dv6-2A0A075B650 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,05■■□□□ 1,12
Trav15-2-dv6-2A0A075B650 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22,03■■□□□ 1,12
Trav15-2-dv6-2A0A075B650 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
Trav15-2-dv6-2A0A075B650 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
Trav15-2-dv6-2A0A075B650 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,98■■□□□ 1,11
Trav15-2-dv6-2A0A075B650 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Trav15-2-dv6-2A0A075B650 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,97■■□□□ 1,11
Trav15-2-dv6-2A0A075B650 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,95■■□□□ 1,1
Trav15-2-dv6-2A0A075B650 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Trav15-2-dv6-2A0A075B650 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21,94■■□□□ 1,1
Trav15-2-dv6-2A0A075B650 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,93■■□□□ 1,1
Trav15-2-dv6-2A0A075B650 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,91■■□□□ 1,1
Trav15-2-dv6-2A0A075B650 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,91■■□□□ 1,1
Trav15-2-dv6-2A0A075B650 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21,86■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Gm2415-204ENSMUST00000190235 2004 ntBASIC21,86■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,86■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Gm25238-201ENSMUST00000174914 89 ntBASIC21,85■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Trav15-2-dv6-2A0A075B650 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,82■■□□□ 1,08
Trav15-2-dv6-2A0A075B650 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21,82■■□□□ 1,08
Trav15-2-dv6-2A0A075B650 Zfp131-207ENSMUST00000224946 1783 ntBASIC21,82■■□□□ 1,08
Trav15-2-dv6-2A0A075B650 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Trav15-2-dv6-2A0A075B650 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,79■■□□□ 1,08
Trav15-2-dv6-2A0A075B650 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,08
Trav15-2-dv6-2A0A075B650 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21,76■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,75■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21,75■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21,74■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,73■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,73■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21,71■■□□□ 1,07
Trav15-2-dv6-2A0A075B650 Gm6658-202ENSMUST00000209493 1885 ntBASIC21,69■■□□□ 1,06
Trav15-2-dv6-2A0A075B650 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21,64■■□□□ 1,06
Trav15-2-dv6-2A0A075B650 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21,64■■□□□ 1,06
Trav15-2-dv6-2A0A075B650 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,63■■□□□ 1,05
Trav15-2-dv6-2A0A075B650 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21,62■■□□□ 1,05
Trav15-2-dv6-2A0A075B650 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Trav15-2-dv6-2A0A075B650 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Trav15-2-dv6-2A0A075B650 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,59■■□□□ 1,05
Trav15-2-dv6-2A0A075B650 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,58■■□□□ 1,05
Trav15-2-dv6-2A0A075B650 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21,58■■□□□ 1,04
Trav15-2-dv6-2A0A075B650 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21,57■■□□□ 1,04
Trav15-2-dv6-2A0A075B650 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Trav15-2-dv6-2A0A075B650 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,56■■□□□ 1,04
Trav15-2-dv6-2A0A075B650 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,55■■□□□ 1,04
Trav15-2-dv6-2A0A075B650 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21,55■■□□□ 1,04
Trav15-2-dv6-2A0A075B650 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,5■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,5■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,49■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,48■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21,48■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,46■■□□□ 1,03
Trav15-2-dv6-2A0A075B650 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Trav15-2-dv6-2A0A075B650 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21,43■■□□□ 1,02
Trav15-2-dv6-2A0A075B650 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,42■■□□□ 1,02
Trav15-2-dv6-2A0A075B650 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Trav15-2-dv6-2A0A075B650 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21,38■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21,35■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Rab21-202ENSMUST00000218831 843 ntBASIC21,35■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21,35■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21,33■■□□□ 1,01
Trav15-2-dv6-2A0A075B650 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21,32■■□□□ 1
Trav15-2-dv6-2A0A075B650 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21,32■■□□□ 1
Trav15-2-dv6-2A0A075B650 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21,32■■□□□ 1
Trav15-2-dv6-2A0A075B650 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Trav15-2-dv6-2A0A075B650 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,3■■□□□ 1
Trav15-2-dv6-2A0A075B650 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21,29■■□□□ 1
Trav15-2-dv6-2A0A075B650 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21,28■■□□□ 1
Trav15-2-dv6-2A0A075B650 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Trav15-2-dv6-2A0A075B650 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21,27■■□□□ 1
Trav15-2-dv6-2A0A075B650 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21,26■□□□□ 0,99
Trav15-2-dv6-2A0A075B650 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21,24■□□□□ 0,99
Trav15-2-dv6-2A0A075B650 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms